RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 NUP88Q99567 741 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-206ENST00000489868 ADAM2Q99965 735 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 ZIM2Q9NZV7 527 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 CALCOCO1Q9P1Z2 691 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 ZNF180Q9UJW8 692 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 ING1Q9UK53 422 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-206ENST00000489868 SLC45A2Q9UMX9 530 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 HS3ST4Q9Y661 456 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 AATKQ6ZMQ8 1374 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 CENPVL1A0A0U1RR11 272 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 DIRC3C9JPN6 131 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 AKAP8O43823 692 aaKnown RBP6.81□□□□□ -1.32
CCDC39-206ENST00000489868 NDUFA10O95299 355 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 MALP21145 153 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 CREMQ03060 361 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 OCA2Q04671 838 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 SLFN5Q08AF3 891 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 ZNF267Q14586 743 aaPredicted RBP6.81□□□□□ -1.32
CCDC39-206ENST00000489868 PPP4R3AQ6IN85 833 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 Q6ZPA2 131 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 GADL1Q6ZQY3 521 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 ZNF627Q7L945 461 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 TTC7BQ86TV6 843 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 IL17RDQ8NFM7 739 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 LARP4BQ92615 738 aaKnown RBP6.81□□□□□ -1.32
CCDC39-206ENST00000489868 VSX1Q9NZR4 365 aaPredicted RBP6.81□□□□□ -1.32
CCDC39-206ENST00000489868 USP25Q9UHP3 1055 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 FZD1Q9UP38 647 aa6.81□□□□□ -1.32
CCDC39-206ENST00000489868 A0A1B0GTW7 788 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 F2RL2O00254 374 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 RNASET2O00584 256 aaKnown RBP6.8□□□□□ -1.32
CCDC39-206ENST00000489868 SLPIP03973 132 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 CFIP05156 583 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 AKAP5P24588 427 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 PABPC1LQ4VXU2 614 aaKnown RBP6.8□□□□□ -1.32
CCDC39-206ENST00000489868 B3GNTL1Q67FW5 361 aaPredicted RBP6.8□□□□□ -1.32
CCDC39-206ENST00000489868 ANKRD13AQ8IZ07 590 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 HAS1Q92839 578 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 HPS3Q969F9 1004 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 MYEOVQ96EZ4 313 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 MARS2Q96GW9 593 aaKnown RBP6.8□□□□□ -1.32
CCDC39-206ENST00000489868 TMPRSS5Q9H3S3 457 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 HSFX1Q9UBD0 423 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 PCDHA3Q9Y5H8 950 aa6.8□□□□□ -1.32
CCDC39-206ENST00000489868 E2F8A0AVK6 867 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 TMEM200CA6NKL6 621 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 PRPF3O43395 683 aaKnown RBP6.79□□□□□ -1.32
CCDC39-206ENST00000489868 HAUS5O94927 633 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 FCER1AP12319 257 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 ALAS1P13196 640 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 LAG3P18627 525 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 FGFR4P22455 802 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 MAP2K6P52564 334 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 ABHD18Q0P651 414 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 NOGQ13253 232 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 PGS1Q32NB8 556 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 ATAT1Q5SQI0 421 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 SLC4A10Q6U841 1118 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 MAPKAPK5Q8IW41 473 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 FITM2Q8N6M3 262 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 CPEB3Q8NE35 698 aaKnown RBP6.79□□□□□ -1.32
CCDC39-206ENST00000489868 TBC1D15Q8TC07 691 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 MVB12AQ96EY5 273 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 TLR10Q9BXR5 811 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 ANLNQ9NQW6 1124 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 ATP11BQ9Y2G3 1177 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 FPGT-TNNI3KV9GXZ4 949 aa6.79□□□□□ -1.32
CCDC39-206ENST00000489868 GAGE12BA1L429 117 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 GAGE12HA6NDE8 117 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 PRSS29PA6NIE9 313 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 UNC119BA6NIH7 251 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 SLC43A1O75387 559 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 AGFG2O95081 481 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 ZFPL1O95159 310 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 S100BP04271 92 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-206ENST00000489868 ALDH2P05091 517 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 CKBP12277 381 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 KRT4P19013 534 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 MAKP20794 623 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 PTGS2P35354 604 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 HSD11B2P80365 405 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 NFE2Q16621 373 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-206ENST00000489868 B3GNT9Q6UX72 402 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 PROKR1Q8TCW9 393 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 RGMAQ96B86 450 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 CAMKK2Q96RR4 588 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 PCED1AQ9H1Q7 454 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 ANKFY1Q9P2R3 1169 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 EID1Q9Y6B2 187 aa6.78□□□□□ -1.32
CCDC39-206ENST00000489868 DTNBO60941 627 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 RFPL1O75677 317 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 SCGB1D2O95969 90 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 FTLP02792 175 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-206ENST00000489868 CT47B1P0C2W7 299 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-206ENST00000489868 MTHFD1P11586 935 aaKnown RBP6.77□□□□□ -1.33
CCDC39-206ENST00000489868 MCM7P33993 719 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 HK3P52790 923 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 TIGD2Q4W5G0 525 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 IFIT1BQ5T764 474 aaKnown RBP6.77□□□□□ -1.33
CCDC39-206ENST00000489868 UTP14CQ5TAP6 766 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms