RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 MAML2Q8IZL2 1156 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-206ENST00000489451 ZBTB45Q96K62 511 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-206ENST00000489451 IFT74Q96LB3 600 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 DDX23Q9BUQ8 820 aaKnown RBP12.91□□□□□ -0.34
ACTN4-206ENST00000489451 SEMA4AQ9H3S1 761 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 UPF2Q9HAU5 1272 aaKnown RBP12.91□□□□□ -0.34
ACTN4-206ENST00000489451 BACE2Q9Y5Z0 518 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 WDR27A2RRH5 827 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 K7ERI5 159 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 STARD6P59095 220 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 ROR1Q01973 937 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 ZNF568Q3ZCX4 644 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 SPECC1Q5M775 1068 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 PJA1Q8NG27 643 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 LRRC15Q8TF66 581 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 ING5Q8WYH8 240 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-206ENST00000489451 PNMA5Q96PV4 448 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 PLA2G2FQ9BZM2 168 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 HAPLN2Q9GZV7 340 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 TMEM134Q9H6X4 195 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.9□□□□□ -0.34
ACTN4-206ENST00000489451 SH2B1Q9NRF2 756 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-206ENST00000489451 CNTN3Q9P232 1028 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 POLIQ9UNA4 740 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 MTF2Q9Y483 593 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-206ENST00000489451 ZFP37Q9Y6Q3 630 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-206ENST00000489451 R4GN57 208 aa12.9□□□□□ -0.34
ACTN4-206ENST00000489451 EP300Q09472 2414 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-206ENST00000489451 CCDC169A6NNP5 214 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 SFI1A8K8P3 1242 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 PODXLO00592 558 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 KCNE1P15382 129 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 CEBPBP17676 345 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 MRPL58Q14197 206 aaKnown RBP12.89□□□□□ -0.35
ACTN4-206ENST00000489451 UVSSAQ2YD98 709 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 SEZ6Q53EL9 994 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 VARS2Q5ST30 1063 aaKnown RBP12.89□□□□□ -0.35
ACTN4-206ENST00000489451 HYIQ5T013 277 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 SLC8B1Q6J4K2 584 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 PDXDC1Q6P996 788 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 FAM184AQ8NB25 1140 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
ACTN4-206ENST00000489451 UROC1Q96N76 676 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 KXD1Q9BQD3 176 aa12.89□□□□□ -0.35
ACTN4-206ENST00000489451 MRPL4Q9BYD3 311 aaKnown RBP12.89□□□□□ -0.35
ACTN4-206ENST00000489451 NOL7Q9UMY1 257 aaKnown RBP12.89□□□□□ -0.35
ACTN4-206ENST00000489451 CEP250Q9BV73 2442 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 ARHGEF37A1IGU5 675 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 STK25O00506 426 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 SLC16A4O15374 487 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 ABLIM3O94929 683 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 CD2BP2O95400 341 aaKnown RBP12.88□□□□□ -0.35
ACTN4-206ENST00000489451 SEC24AO95486 1093 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 RHOP08100 348 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 FCARP24071 287 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 GUCY2CP25092 1073 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 PRPHP41219 470 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 CCR2P41597 374 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 DMP1Q13316 513 aaPredicted RBP12.88□□□□□ -0.35
ACTN4-206ENST00000489451 SNW1Q13573 536 aaKnown RBP12.88□□□□□ -0.35
ACTN4-206ENST00000489451 SLC10A6Q3KNW5 377 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 PABPC1LQ4VXU2 614 aaKnown RBP12.88□□□□□ -0.35
ACTN4-206ENST00000489451 PRSS36Q5K4E3 855 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 MPZL3Q6UWV2 235 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 ANKS3Q6ZW76 656 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 TMEM161BQ8NDZ6 487 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 TCEAL4Q96EI5 215 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 NTPCRQ9BSD7 190 aaKnown RBP12.88□□□□□ -0.35
ACTN4-206ENST00000489451 KMT5AQ9NQR1 393 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 TUBGCP4Q9UGJ1 667 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 KCNH3Q9ULD8 1083 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 SIT1Q9Y3P8 196 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 TSC2P49815 1807 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 NCANO14594 1321 aa12.88□□□□□ -0.35
ACTN4-206ENST00000489451 ANK1P16157 1881 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 FAM208BQ5VWN6 2430 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 XYLBO75191 536 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 MOSPD3O75425 235 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 VNN2O95498 520 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 SP9P0CG40 484 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 MCF2P10911 925 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
ACTN4-206ENST00000489451 SDHBP21912 280 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 SLC12A3P55017 1021 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 ATP2C1P98194 919 aaPredicted RBP12.87□□□□□ -0.35
ACTN4-206ENST00000489451 RAD51AP2Q09MP3 1159 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 GNL2Q13823 731 aaKnown RBP12.87□□□□□ -0.35
ACTN4-206ENST00000489451 MLF2Q15773 248 aaPredicted RBP12.87□□□□□ -0.35
ACTN4-206ENST00000489451 MTSS1LQ765P7 747 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 C1orf210Q8IVY1 113 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 ZNF461Q8TAF7 563 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 RUBCNQ92622 972 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 CCDC94Q9BW85 323 aaPredicted RBP12.87□□□□□ -0.35
ACTN4-206ENST00000489451 AVENQ9NQS1 362 aaPredicted RBP12.87□□□□□ -0.35
ACTN4-206ENST00000489451 FBXL5Q9UKA1 691 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 DNM3Q9UQ16 869 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 OTOGLQ3ZCN5 2332 aa12.87□□□□□ -0.35
ACTN4-206ENST00000489451 NPHP3-ACAD11A0A0J9YXS1 232 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 LAD1O00515 517 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms