RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 ZNF461Q8TAF7 563 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 ADAMTS14Q8WXS8 1223 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 CCDC51Q96ER9 411 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 DCBLD2Q96PD2 775 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 SH2D3AQ9BRG2 576 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 NIFKQ9BYG3 293 aaKnown RBP12.84□□□□□ -0.35
HDAC6-233ENST00000489352 GLT8D2Q9H1C3 349 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 CYP4F11Q9HBI6 524 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 ASAH2Q9NR71 780 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 SNTG2Q9NY99 539 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 KLK14Q9P0G3 267 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 MTRRQ9UBK8 725 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 CACNG4Q9UBN1 327 aa12.84□□□□□ -0.35
HDAC6-233ENST00000489352 APOBEC2Q9Y235 224 aaKnown RBP12.84□□□□□ -0.35
HDAC6-233ENST00000489352 GON4LQ3T8J9 2241 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 IGKV6-21A0A0C4DH24 114 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 CASTOR2A6NHX0 329 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 RNF40O75150 1001 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 MAFO75444 373 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-233ENST00000489352 KIF4AO95239 1232 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 NTRK1P04629 796 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 GJA1P17302 382 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 JAK3P52333 1124 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 PDE1AP54750 535 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 FCHO2Q0JRZ9 810 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 UGCGQ16739 394 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 ANKS3Q6ZW76 656 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 ZFYVE19Q96K21 471 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 PAAF1Q9BRP4 392 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 CSRNP2Q9H175 543 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 EBF1Q9UH73 591 aa12.83□□□□□ -0.36
HDAC6-233ENST00000489352 IGLV3-22A0A075B6J6 115 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 A0A087WV48 116 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 CFIP05156 583 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 FTH1P19P0C7X4 201 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 DPP6P42658 865 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 ARPP19P56211 112 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 AMPD2Q01433 879 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 CFHR1Q03591 330 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 TEAD2Q15562 447 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 ITPRIPL2Q3MIP1 535 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 PRR16Q569H4 304 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 ANKRD45Q5TZF3 282 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 GPIHBP1Q8IV16 184 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 EXOC8Q8IYI6 725 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 NCOA7Q8NI08 942 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 PRPF31Q8WWY3 499 aaKnown RBP12.82□□□□□ -0.36
HDAC6-233ENST00000489352 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
HDAC6-233ENST00000489352 SLC7A3Q8WY07 619 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 EXOC4Q96A65 974 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 CPB2Q96IY4 423 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 MINDY3Q9H8M7 445 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 POLR3BQ9NW08 1133 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-233ENST00000489352 THG1LQ9NWX6 298 aaKnown RBP12.82□□□□□ -0.36
HDAC6-233ENST00000489352 DKK4Q9UBT3 224 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-233ENST00000489352 CEP192Q8TEP8 1941 aa12.82□□□□□ -0.36
HDAC6-233ENST00000489352 TEX15Q9BXT5 2789 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 GOLGA4Q13439 2230 aaKnown RBP12.81□□□□□ -0.36
HDAC6-233ENST00000489352 TMEM150BA6NC51 233 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 SMCO2A6NFE2 343 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 CCDC69A6NI79 296 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 TRAPPC3O43617 180 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 GFPT1Q06210 699 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-233ENST00000489352 CYP4F3Q08477 520 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 PCBP1Q15365 356 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDAC6-233ENST00000489352 JAKMIP3Q5VZ66 844 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 LPCAT2Q7L5N7 544 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 SYT12Q8IV01 421 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 HS6ST3Q8IZP7 471 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 KIF2CQ99661 725 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 TPSD1Q9BZJ3 242 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 NXF3Q9H4D5 531 aaKnown RBP12.81□□□□□ -0.36
HDAC6-233ENST00000489352 MBD1Q9UIS9 605 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-233ENST00000489352 INSL5Q9Y5Q6 135 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 BACE2Q9Y5Z0 518 aa12.81□□□□□ -0.36
HDAC6-233ENST00000489352 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-233ENST00000489352 NUP210Q8TEM1 1887 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-233ENST00000489352 PTPN13Q12923 2485 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 HIP1O00291 1037 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 GAS7O60861 476 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 THP07101 528 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 CYP3A4P08684 503 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 FGFR3P22607 806 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 TNK2Q07912 1038 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 LAMTOR4Q0VGL1 99 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 PSMD2Q13200 908 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 DMC1Q14565 340 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 TMEM196Q5HYL7 178 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 WWC2Q6AWC2 1192 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 PPP1R18Q6NYC8 613 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 SLC23A3Q6PIS1 610 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 CASC1Q6TDU7 716 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 LRRC69Q6ZNQ3 347 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 SYT13Q7L8C5 426 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 ARID3BQ8IVW6 561 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-233ENST00000489352 TMEFF1Q8IYR6 380 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 RNF149Q8NC42 400 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 SPRYD3Q8NCJ5 442 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms