RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 ELAVL2Q12926 359 aaKnown RBP17.28■□□□□ 0.36
HDAC7-224ENST00000488927 STX1AQ16623 288 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 DUOXA2Q1HG44 320 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 DPCR1Q3MIW9 517 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 PDE12Q6L8Q7 609 aaKnown RBP17.28■□□□□ 0.36
HDAC7-224ENST00000488927 TTI2Q6NXR4 508 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 DDX53Q86TM3 631 aaKnown RBP17.28■□□□□ 0.36
HDAC7-224ENST00000488927 FAM186BQ8IYM0 893 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 SPPL3Q8TCT6 385 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 TMC2Q8TDI7 906 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 GDPD5Q8WTR4 605 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 FAM161BQ96MY7 647 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 CGRRF1Q99675 332 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 PRDM12Q9H4Q4 367 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 ANO10Q9NW15 660 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 TUBGCP4Q9UGJ1 667 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 ADAM28Q9UKQ2 775 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 TDRD15B5MCY1 1934 aaKnown RBP17.27■□□□□ 0.36
HDAC7-224ENST00000488927 SF3B1O75533 1304 aaKnown RBP eCLIP17.27■□□□□ 0.36
HDAC7-224ENST00000488927 EPOPA6NHQ4 379 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 TULP1O00294 542 aaPredicted RBP17.27■□□□□ 0.36
HDAC7-224ENST00000488927 AKAP3O75969 853 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 GNA14O95837 355 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 DLATP10515 647 aaKnown RBP17.27■□□□□ 0.36
HDAC7-224ENST00000488927 TNNI1P19237 187 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 CASP4P49662 377 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 NFKBIBQ15653 356 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 Q7L0L9 218 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 EFCAB13Q8IY85 973 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 CSGALNACT2Q8N6G5 542 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 POF1BQ8WVV4 589 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 CCDC127Q96BQ5 260 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 GOLGA2P5Q9HBQ8 144 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 ALG13Q9NP73 1137 aaKnown RBP17.27■□□□□ 0.36
HDAC7-224ENST00000488927 INTS13Q9NVM9 706 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 MARCH5Q9NX47 278 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 DPP3Q9NY33 737 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 ITGA11Q9UKX5 1188 aa17.27■□□□□ 0.36
HDAC7-224ENST00000488927 R3HCC1Q9Y3T6 440 aaKnown RBP17.27■□□□□ 0.36
HDAC7-224ENST00000488927 IKBKBO14920 756 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 GRM6O15303 877 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 KIF4AO95239 1232 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 POU3F3P20264 500 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-224ENST00000488927 CLDN10P78369 228 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 FILIP1Q7Z7B0 1213 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 TMEM173Q86WV6 379 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-224ENST00000488927 PARD3BQ8TEW8 1205 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 MRPL38Q96DV4 380 aaKnown RBP17.26■□□□□ 0.35
HDAC7-224ENST00000488927 PAAF1Q9BRP4 392 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 METTL14Q9HCE5 456 aaKnown RBP17.26■□□□□ 0.35
HDAC7-224ENST00000488927 NGRNQ9NPE2 291 aaKnown RBP17.26■□□□□ 0.35
HDAC7-224ENST00000488927 TLR9Q9NR96 1032 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 MTMR10Q9NXD2 777 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 SSX2IPQ9Y2D8 614 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 NUB1Q9Y5A7 615 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 NLRC5Q86WI3 1866 aa17.26■□□□□ 0.35
HDAC7-224ENST00000488927 STX10O60499 249 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 LPXNO60711 386 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 SOD2P04179 222 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 PNPLA4P41247 253 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 VAMP7P51809 220 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 WNT7BP56706 349 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 STX17P56962 302 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 MCCD1P59942 119 aaPredicted RBP17.25■□□□□ 0.35
HDAC7-224ENST00000488927 BFSP1Q12934 665 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 C9orf57Q5W0N0 161 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 FUT10Q6P4F1 479 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 ZNF560Q96MR9 790 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 CDX2Q99626 313 aaPredicted RBP17.25■□□□□ 0.35
HDAC7-224ENST00000488927 DUSP9Q99956 384 aaKnown RBP17.25■□□□□ 0.35
HDAC7-224ENST00000488927 MTMR12Q9C0I1 747 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 KIAA1671Q9BY89 1806 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 CHD7Q9P2D1 2997 aa17.25■□□□□ 0.35
HDAC7-224ENST00000488927 ANO9A1A5B4 782 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 ARHGEF37A1IGU5 675 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 RFXAPO00287 272 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 PIRO00625 290 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 CCDC192P0DO97 292 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 RBP5P82980 135 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 TYRO3Q06418 890 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 TPD52L1Q16890 204 aaPredicted RBP17.24■□□□□ 0.35
HDAC7-224ENST00000488927 USP41Q3LFD5 358 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 TIGD5Q53EQ6 642 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 FRMD5Q7Z6J6 570 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 GPR65Q8IYL9 337 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 RNF168Q8IYW5 571 aaPredicted RBP17.24■□□□□ 0.35
HDAC7-224ENST00000488927 VPS52Q8N1B4 723 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 LRRC52Q8N7C0 313 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 BCL7CQ8WUZ0 217 aaPredicted RBP17.24■□□□□ 0.35
HDAC7-224ENST00000488927 RABGGTAQ92696 567 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 PPP2R3CQ969Q6 453 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 HERC2P3Q9BVR0 1158 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 NAT10Q9H0A0 1025 aaKnown RBP17.24■□□□□ 0.35
HDAC7-224ENST00000488927 CACNG4Q9UBN1 327 aa17.24■□□□□ 0.35
HDAC7-224ENST00000488927 ARMCX3Q9UH62 379 aaPredicted RBP17.24■□□□□ 0.35
HDAC7-224ENST00000488927 LRRIQ3A6PVS8 624 aaPredicted RBP17.23■□□□□ 0.35
HDAC7-224ENST00000488927 EFEMP2O95967 443 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 ITGB3P05106 788 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 CTSAP10619 480 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 GTF2H1P32780 548 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms