RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 SNX27Q96L92 541 aa12□□□□□ -0.49
NUP98-212ENST00000488828 IPO9Q96P70 1041 aaKnown RBP12□□□□□ -0.49
NUP98-212ENST00000488828 PAAF1Q9BRP4 392 aa12□□□□□ -0.49
NUP98-212ENST00000488828 FAM213AQ9BRX8 229 aa12□□□□□ -0.49
NUP98-212ENST00000488828 STRA6Q9BX79 667 aa12□□□□□ -0.49
NUP98-212ENST00000488828 PLEKHA5Q9HAU0 1116 aa12□□□□□ -0.49
NUP98-212ENST00000488828 MRPL17Q9NRX2 175 aaKnown RBP12□□□□□ -0.49
NUP98-212ENST00000488828 THEGQ9P2T0 379 aa12□□□□□ -0.49
NUP98-212ENST00000488828 STK39Q9UEW8 545 aa12□□□□□ -0.49
NUP98-212ENST00000488828 ADAM28Q9UKQ2 775 aa12□□□□□ -0.49
NUP98-212ENST00000488828 COG5Q9UP83 839 aa12□□□□□ -0.49
NUP98-212ENST00000488828 ZMYM2Q9UBW7 1377 aa12□□□□□ -0.49
NUP98-212ENST00000488828 RALGAPA2Q2PPJ7 1873 aa12□□□□□ -0.49
NUP98-212ENST00000488828 GOLGA8IPA6NC78 632 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 GOLGA8JA6NMD2 632 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 HIDE1A8MVS5 230 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 F8W810 466 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 PRPF40AO75400 957 aaKnown RBP11.99□□□□□ -0.49
NUP98-212ENST00000488828 URODP06132 367 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 KCNA5P22460 613 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 CLCNKBP51801 687 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 TFF2Q03403 129 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 FAM160A1Q05DH4 1040 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 HYAL1Q12794 435 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 PSMD2Q13200 908 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 ENOX2Q16206 610 aaKnown RBP11.99□□□□□ -0.49
NUP98-212ENST00000488828 AAK1Q2M2I8 961 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 LLGL2Q6P1M3 1020 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 ARMCX5Q6P1M9 558 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 DCLRE1AQ6PJP8 1040 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 ALKAL1Q6UXT8 129 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 TAS1R1Q7RTX1 841 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 ADGRD2Q7Z7M1 963 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 ANKK1Q8NFD2 765 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 ZNF507Q8TCN5 953 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 KCNN1Q92952 543 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 C18orf25Q96B23 403 aaPredicted RBP11.99□□□□□ -0.49
NUP98-212ENST00000488828 SAAL1Q96ER3 474 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 UROC1Q96N76 676 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 ZMAT2Q96NC0 199 aaKnown RBP11.99□□□□□ -0.49
NUP98-212ENST00000488828 PPP1R10Q96QC0 940 aaKnown RBP11.99□□□□□ -0.49
NUP98-212ENST00000488828 GOLGA2P5Q9HBQ8 144 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 NUB1Q9Y5A7 615 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 TCHHQ07283 1943 aa11.99□□□□□ -0.49
NUP98-212ENST00000488828 C2orf71A6NGG8 1288 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 EIF3DO15371 548 aaKnown RBP eCLIP11.98□□□□□ -0.49
NUP98-212ENST00000488828 XPOTO43592 962 aaKnown RBP11.98□□□□□ -0.49
NUP98-212ENST00000488828 TRAPPC3O43617 180 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 KINO60870 393 aaKnown RBP11.98□□□□□ -0.49
NUP98-212ENST00000488828 GADD45BO75293 160 aaPredicted RBP11.98□□□□□ -0.49
NUP98-212ENST00000488828 SMC2O95347 1197 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 LDHAP00338 332 aaKnown RBP11.98□□□□□ -0.49
NUP98-212ENST00000488828 SRGAP2BP0DMP2 458 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 CTSAP10619 480 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 KCNE1P15382 129 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 GARTP22102 1010 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 KLRC2P26717 231 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 ADSSP30520 456 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 NDUFV1P49821 464 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 MRPS5P82675 430 aaKnown RBP11.98□□□□□ -0.49
NUP98-212ENST00000488828 USP41Q3LFD5 358 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 FAM171A1Q5VUB5 890 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 FUT10Q6P4F1 479 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 HS2ST1Q7LGA3 356 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 CD302Q8IX05 232 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 FMR1NBQ8N0W7 255 aaPredicted RBP11.98□□□□□ -0.49
NUP98-212ENST00000488828 B3GALT6Q96L58 329 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 CBWD1Q9BRT8 395 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 REPIN1Q9BWE0 567 aaKnown RBP11.98□□□□□ -0.49
NUP98-212ENST00000488828 EMILIN2Q9BXX0 1053 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 MARCH5Q9NX47 278 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 CNTN3Q9P232 1028 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 CPSF3Q9UKF6 684 aaKnown RBP11.98□□□□□ -0.49
NUP98-212ENST00000488828 SSX2IPQ9Y2D8 614 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 STYXL1Q9Y6J8 313 aa11.98□□□□□ -0.49
NUP98-212ENST00000488828 COL4A4P53420 1690 aaPredicted RBP11.97□□□□□ -0.49
NUP98-212ENST00000488828 SF3B1O75533 1304 aaKnown RBP eCLIP11.97□□□□□ -0.491e-8■■■■■ 103.4
NUP98-212ENST00000488828 TTC26A0AVF1 554 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 H3BQ06 376 aaPredicted RBP11.97□□□□□ -0.49
NUP98-212ENST00000488828 PODXLO00592 558 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 FSCN2O14926 492 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 CLIC2O15247 247 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 LINC01565O15544 149 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 KLRC4O43908 158 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 KIF20AO95235 890 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 KIF4AO95239 1232 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 SOD2P04179 222 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 RPL9P32969 192 aaKnown RBP11.97□□□□□ -0.49
NUP98-212ENST00000488828 GLUD2P49448 558 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 CYP2J2P51589 502 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 SOX4Q06945 474 aaPredicted RBP11.97□□□□□ -0.49
NUP98-212ENST00000488828 DPYDQ12882 1025 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 ELAVL2Q12926 359 aaKnown RBP11.97□□□□□ -0.49
NUP98-212ENST00000488828 STK4Q13043 487 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 PNOCQ13519 176 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 TMEM132DQ14C87 1099 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 CLUL1Q15846 466 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 UPP1Q16831 310 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 XKR4Q5GH76 650 aa11.97□□□□□ -0.49
NUP98-212ENST00000488828 JADE1Q6IE81 842 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms