RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 PLCB3Q01970 1234 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 UBE3AQ05086 875 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 CYP24A1Q07973 514 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 TPD52L1Q16890 204 aaPredicted RBP17.04■□□□□ 0.32
C9orf3-219ENST00000488186 FAM186BQ8IYM0 893 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 SPPL3Q8TCT6 385 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 TMEM174Q8WUU8 243 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 POF1BQ8WVV4 589 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 MYLIPQ8WY64 445 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 DPP3Q9NY33 737 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 TMEM63CQ9P1W3 806 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 TUBGCP4Q9UGJ1 667 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 NUB1Q9Y5A7 615 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 CITO14578 2027 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 TRIM49BA6NDI0 452 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 GRM6O15303 877 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 TRAPPC3O43617 180 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 B4GALT3O60512 393 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 FGFR1OPO95684 399 aaKnown RBP17.03■□□□□ 0.32
C9orf3-219ENST00000488186 SOX4Q06945 474 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-219ENST00000488186 ADGRE1Q14246 886 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 PSMD6Q15008 389 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 NAB2Q15742 525 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 DUOXA2Q1HG44 320 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 SPATA1Q5VX52 437 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 TMC7Q7Z402 723 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 HASPINQ8TF76 798 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 MFSD14AQ96MC6 490 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 PAAF1Q9BRP4 392 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 CACNG4Q9UBN1 327 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 ADAM28Q9UKQ2 775 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 LZTS1Q9Y250 596 aa17.03■□□□□ 0.32
C9orf3-219ENST00000488186 CASP4P49662 377 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 PMS1P54277 932 aaKnown RBP17.02■□□□□ 0.32
C9orf3-219ENST00000488186 ZBTB6Q15916 424 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 UPP1Q16831 310 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 ZCWPW2Q504Y3 356 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 KIAA1841Q6NSI8 718 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 RBM43Q6ZSC3 357 aaKnown RBP17.02■□□□□ 0.32
C9orf3-219ENST00000488186 DDX53Q86TM3 631 aaKnown RBP17.02■□□□□ 0.32
C9orf3-219ENST00000488186 WDR49Q8IV35 697 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 VPS52Q8N1B4 723 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 CSGALNACT2Q8N6G5 542 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 EEF2KMTQ96G04 330 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 ENTPD7Q9NQZ7 604 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 TLR9Q9NR96 1032 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 ANO10Q9NW15 660 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 RWDD2AQ9UIY3 292 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 MTCH2Q9Y6C9 303 aa17.02■□□□□ 0.32
C9orf3-219ENST00000488186 MYO7AQ13402 2215 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 COL4A4P53420 1690 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-219ENST00000488186 TRIP11Q15643 1979 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 MAPK13O15264 365 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 PHACTR2O75167 634 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 AKAP3O75969 853 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 KIF4AO95239 1232 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 KRT19P08727 400 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 GUCY2FP51841 1108 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 ELAVL2Q12926 359 aaKnown RBP17.01■□□□□ 0.31
C9orf3-219ENST00000488186 NFKBIBQ15653 356 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 DPCR1Q3MIW9 517 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 CCDC40Q4G0X9 1142 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 LMBRD2Q68DH5 695 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-219ENST00000488186 INTS8Q75QN2 995 aaKnown RBP17.01■□□□□ 0.31
C9orf3-219ENST00000488186 TMEM173Q86WV6 379 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-219ENST00000488186 CREBRFQ8IUR6 639 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 MRPL38Q96DV4 380 aaKnown RBP17.01■□□□□ 0.31
C9orf3-219ENST00000488186 CEP63Q96MT8 703 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 POP1Q99575 1024 aaKnown RBP17.01■□□□□ 0.31
C9orf3-219ENST00000488186 CGRRF1Q99675 332 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 MKNK1Q9BUB5 465 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 INTS13Q9NVM9 706 aa17.01■□□□□ 0.31
C9orf3-219ENST00000488186 SF3B1O75533 1304 aaKnown RBP eCLIP17■□□□□ 0.31
C9orf3-219ENST00000488186 SLC16A3O15427 465 aaKnown RBP17■□□□□ 0.31
C9orf3-219ENST00000488186 CLSTN1O94985 981 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 LRPAP1P30533 357 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 VAMP7P51809 220 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 AP3M2P53677 418 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 STX1AQ16623 288 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 CT47A1Q5JQC4 288 aaPredicted RBP17■□□□□ 0.31
C9orf3-219ENST00000488186 PDE12Q6L8Q7 609 aaKnown RBP17■□□□□ 0.31
C9orf3-219ENST00000488186 FUT10Q6P4F1 479 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 FILIP1Q7Z7B0 1213 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 EFCAB13Q8IY85 973 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 MICALL1Q8N3F8 863 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 TMC2Q8TDI7 906 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 PPP2R3CQ969Q6 453 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 TCF25Q9BQ70 676 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 SRRTQ9BXP5 876 aaKnown RBP17■□□□□ 0.31
C9orf3-219ENST00000488186 MTMR12Q9C0I1 747 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 NGRNQ9NPE2 291 aaKnown RBP17■□□□□ 0.31
C9orf3-219ENST00000488186 MARCH5Q9NX47 278 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 ITGA11Q9UKX5 1188 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 AGAP1Q9UPQ3 857 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 SSX2IPQ9Y2D8 614 aa17■□□□□ 0.31
C9orf3-219ENST00000488186 F8W810 466 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 TMEM189-UBE2V1I3L0A0 370 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 STX10O60499 249 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 CXCL14O95715 111 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 GNA14O95837 355 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms