RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 TMEM130Q8N3G9 435 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 SLC44A3Q8N4M1 653 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 MYCT1Q8N699 235 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 RASSF8Q8NHQ8 419 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 LARP4BQ92615 738 aaKnown RBP21.1■□□□□ 0.97
CD55-209ENST00000488171 BICD1Q96G01 975 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 EPSTI1Q96J88 318 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 FIZ1Q96SL8 496 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 PHOX2BQ99453 314 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 PARVGQ9HBI0 331 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 TUBGCP4Q9UGJ1 667 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 TBX20Q9UMR3 447 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 DOCK6Q96HP0 2047 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 TTC26A0AVF1 554 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 ANHXE9PGG2 379 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 K7ENM7 598 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 SYN3O14994 580 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 FAM189A1O60320 539 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 TBC1D4O60343 1298 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 PIGRP01833 764 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 POU2F2P09086 479 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 CLTAP09496 248 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 TNFSF9P41273 254 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 MATR3P43243 847 aaKnown RBP eCLIP21.09■□□□□ 0.97
CD55-209ENST00000488171 MRE11P49959 708 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 SPECC1Q5M775 1068 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 ASTLQ6HA08 431 aaPredicted RBP21.09■□□□□ 0.97
CD55-209ENST00000488171 SLC8B1Q6J4K2 584 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 FAM173BQ6P4H8 233 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 NXPE3Q969Y0 559 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 MFSD1Q9H3U5 465 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 PLEKHA5Q9HAU0 1116 aa21.09■□□□□ 0.97
CD55-209ENST00000488171 FBXO2Q9UK22 296 aaPredicted RBP21.09■□□□□ 0.97
CD55-209ENST00000488171 TRAK2O60296 914 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 SCP2P22307 547 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 MARCKSP29966 332 aaPredicted RBP21.08■□□□□ 0.96
CD55-209ENST00000488171 DDIT3P35638 169 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 LIG4P49917 911 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 NUBP1P53384 320 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 ROR1Q01973 937 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 SPAG1Q07617 926 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 HTR4Q13639 388 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 MRPL58Q14197 206 aaKnown RBP21.08■□□□□ 0.96
CD55-209ENST00000488171 ZBTB41Q5SVQ8 909 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 CWF19L1Q69YN2 538 aaKnown RBP21.08■□□□□ 0.96
CD55-209ENST00000488171 RTL10Q7L3V2 364 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 SUSD3Q96L08 255 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 POLIQ9UNA4 740 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 NUB1Q9Y5A7 615 aa21.08■□□□□ 0.96
CD55-209ENST00000488171 HNRNPDLO14979 420 aaKnown RBP21.07■□□□□ 0.96
CD55-209ENST00000488171 XYLBO75191 536 aa21.07■□□□□ 0.96
CD55-209ENST00000488171 KRT18P05783 430 aaKnown RBP21.07■□□□□ 0.96
CD55-209ENST00000488171 NPR3P17342 541 aa21.07■□□□□ 0.96
CD55-209ENST00000488171 CLCN5P51795 746 aa21.07■□□□□ 0.96
CD55-209ENST00000488171 ZBTB6Q15916 424 aa21.07■□□□□ 0.96
CD55-209ENST00000488171 SLC39A4Q6P5W5 647 aa21.07■□□□□ 0.96
CD55-209ENST00000488171 ST13P5Q8NFI4 369 aaPredicted RBP21.07■□□□□ 0.96
CD55-209ENST00000488171 INTS4Q96HW7 963 aaKnown RBP21.07■□□□□ 0.96
CD55-209ENST00000488171 ZHX3Q9H4I2 956 aa21.07■□□□□ 0.96
CD55-209ENST00000488171 HCFC1R1Q9NWW0 138 aa21.07■□□□□ 0.96
CD55-209ENST00000488171 SRPRBQ9Y5M8 271 aaKnown RBP21.07■□□□□ 0.96
CD55-209ENST00000488171 ZFP37Q9Y6Q3 630 aaPredicted RBP21.07■□□□□ 0.96
CD55-209ENST00000488171 NOTCH4Q99466 2003 aa21.06■□□□□ 0.96
CD55-209ENST00000488171 WDR27A2RRH5 827 aa21.06■□□□□ 0.96
CD55-209ENST00000488171 GALR2O43603 387 aaPredicted RBP21.06■□□□□ 0.96
CD55-209ENST00000488171 ABLIM3O94929 683 aa21.06■□□□□ 0.96
CD55-209ENST00000488171 NMT1P30419 496 aaKnown RBP21.06■□□□□ 0.96
CD55-209ENST00000488171 MCM4P33991 863 aa21.06■□□□□ 0.96
CD55-209ENST00000488171 GTF2BQ00403 316 aa21.06■□□□□ 0.96
CD55-209ENST00000488171 ENOX2Q16206 610 aaKnown RBP21.06■□□□□ 0.96
CD55-209ENST00000488171 SIX5Q8N196 739 aa21.06■□□□□ 0.96
CD55-209ENST00000488171 ZNF461Q8TAF7 563 aa21.06■□□□□ 0.96
CD55-209ENST00000488171 ITFG1Q8TB96 612 aa21.06■□□□□ 0.96
CD55-209ENST00000488171 DNMT3BQ9UBC3 853 aaKnown RBP21.06■□□□□ 0.96
CD55-209ENST00000488171 FBXL21Q9UKT6 434 aa21.06■□□□□ 0.96
CD55-209ENST00000488171 CDH7Q9ULB5 785 aa21.06■□□□□ 0.96
CD55-209ENST00000488171 A0A0B4J269 797 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 LACTBL1A8MY62 500 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 OGTO15294 1046 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 TBCAO75347 108 aaKnown RBP21.05■□□□□ 0.96
CD55-209ENST00000488171 ADRB2P07550 413 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 CFHP08603 1231 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 SRFP11831 508 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 LRPAP1P30533 357 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 KYAT1Q16773 422 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 MAP4K3Q8IVH8 894 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 FLCNQ8NFG4 579 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 DDX12PQ92771 950 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 FGF13Q92913 245 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 KIF12Q96FN5 646 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 CLIC6Q96NY7 704 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 WNT16Q9UBV4 365 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 FBXL5Q9UKA1 691 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 MTMR6Q9Y217 621 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 NUMBLQ9Y6R0 609 aa21.05■□□□□ 0.96
CD55-209ENST00000488171 ARHGEF37A1IGU5 675 aa21.04■□□□□ 0.96
CD55-209ENST00000488171 KRBA1A5PL33 1030 aa21.04■□□□□ 0.96
CD55-209ENST00000488171 H7C4K7 107 aa21.04■□□□□ 0.96
CD55-209ENST00000488171 ARPP19P56211 112 aa21.04■□□□□ 0.96
CD55-209ENST00000488171 CEBPZQ03701 1054 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms