RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 TMEM130Q8N3G9 435 aa13.81□□□□□ -0.2
PRDM2-208ENST00000487453 KLHL23Q8NBE8 558 aa13.81□□□□□ -0.2
PRDM2-208ENST00000487453 GDPD5Q8WTR4 605 aa13.81□□□□□ -0.2
PRDM2-208ENST00000487453 TMEM169Q96HH4 297 aa13.81□□□□□ -0.2
PRDM2-208ENST00000487453 ANKRD36BP1Q96IX9 119 aa13.81□□□□□ -0.2
PRDM2-208ENST00000487453 FAM84AQ96KN4 292 aa13.81□□□□□ -0.2
PRDM2-208ENST00000487453 MFSD14AQ96MC6 490 aa13.81□□□□□ -0.2
PRDM2-208ENST00000487453 CEP63Q96MT8 703 aa13.81□□□□□ -0.2
PRDM2-208ENST00000487453 MMRN2Q9H8L6 949 aa13.81□□□□□ -0.2
PRDM2-208ENST00000487453 SPG21Q9NZD8 308 aa13.81□□□□□ -0.2
PRDM2-208ENST00000487453 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.81□□□□□ -0.2
PRDM2-208ENST00000487453 LRRIQ3A6PVS8 624 aaPredicted RBP13.8□□□□□ -0.2
PRDM2-208ENST00000487453 C5orf67F2Z3F1 127 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 F8W810 466 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 PODXLO00592 558 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 MAPK13O15264 365 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 FGF18O76093 207 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 CLSTN1O94985 981 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 ITGB3P05106 788 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 KRT19P08727 400 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 TRIM49P0CI25 452 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 TRIM49CP0CI26 452 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 DLG4P78352 724 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 ZBTB6Q15916 424 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 CT47A1Q5JQC4 288 aaPredicted RBP13.8□□□□□ -0.2
PRDM2-208ENST00000487453 TCERG1LQ5VWI1 586 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 SPATA1Q5VX52 437 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 TMEM173Q86WV6 379 aaPredicted RBP13.8□□□□□ -0.2
PRDM2-208ENST00000487453 CREBRFQ8IUR6 639 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 PLEKHO2Q8TD55 490 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 PARD3BQ8TEW8 1205 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 CACTINQ8WUQ7 758 aaKnown RBP13.8□□□□□ -0.2
PRDM2-208ENST00000487453 BCL7CQ8WUZ0 217 aaPredicted RBP13.8□□□□□ -0.2
PRDM2-208ENST00000487453 MED15Q96RN5 788 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 POP1Q99575 1024 aaKnown RBP13.8□□□□□ -0.2
PRDM2-208ENST00000487453 COLEC11Q9BWP8 271 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 PLVAPQ9BX97 442 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 SRRTQ9BXP5 876 aaKnown RBP13.8□□□□□ -0.2
PRDM2-208ENST00000487453 NAT10Q9H0A0 1025 aaKnown RBP13.8□□□□□ -0.2
PRDM2-208ENST00000487453 TTYH1Q9H313 450 aaPredicted RBP13.8□□□□□ -0.2
PRDM2-208ENST00000487453 MARCH5Q9NX47 278 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 DPP3Q9NY33 737 aa13.8□□□□□ -0.2
PRDM2-208ENST00000487453 ARMCX3Q9UH62 379 aaPredicted RBP13.8□□□□□ -0.2
PRDM2-208ENST00000487453 R3HCC1Q9Y3T6 440 aaKnown RBP13.8□□□□□ -0.2
PRDM2-208ENST00000487453 TADA2AO75478 443 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 B3GAT3O94766 335 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 RB1P06400 928 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 CYP3A5P20815 502 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 KRT17Q04695 432 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 BIRC3Q13489 604 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 GPM6BQ13491 265 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 UPP1Q16831 310 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 DUOXA2Q1HG44 320 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 HSP90AA4PQ58FG1 418 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 OR5B17Q8NGF7 314 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 TMC2Q8TDI7 906 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 DDX27Q96GQ7 796 aaKnown RBP13.79□□□□□ -0.2
PRDM2-208ENST00000487453 IGSF21Q96ID5 467 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 CNOT6LQ96LI5 555 aaKnown RBP13.79□□□□□ -0.2
PRDM2-208ENST00000487453 PRDM12Q9H4Q4 367 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 ALG13Q9NP73 1137 aaKnown RBP13.79□□□□□ -0.2
PRDM2-208ENST00000487453 INTS13Q9NVM9 706 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 ADAM28Q9UKQ2 775 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 ITGA11Q9UKX5 1188 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 NUB1Q9Y5A7 615 aa13.79□□□□□ -0.2
PRDM2-208ENST00000487453 LAMA3Q16787 3333 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 EPOPA6NHQ4 379 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 H3BNC9 293 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 RFXAPO00287 272 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 PHACTR2O75167 634 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 GNA14O95837 355 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 ITGB1P05556 798 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 LRPAP1P30533 357 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 POLR2BP30876 1174 aaKnown RBP13.78□□□□□ -0.2
PRDM2-208ENST00000487453 RPL9P32969 192 aaKnown RBP13.78□□□□□ -0.2
PRDM2-208ENST00000487453 CA8P35219 290 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 FXR1P51114 621 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRDM2-208ENST00000487453 MYL5Q02045 173 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 C9orf57Q5W0N0 161 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 Q7L0L9 218 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 FAM114A1Q8IWE2 563 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 AOPEPQ8N6M6 819 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 C1orf127Q8N9H9 656 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 C3orf58Q8NDZ4 430 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 FUCA2Q9BTY2 467 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 METTL14Q9HCE5 456 aaKnown RBP13.78□□□□□ -0.2
PRDM2-208ENST00000487453 MAGEC2Q9UBF1 373 aaPredicted RBP13.78□□□□□ -0.2
PRDM2-208ENST00000487453 NFE2L3Q9Y4A8 694 aa13.78□□□□□ -0.2
PRDM2-208ENST00000487453 SF3B1O75533 1304 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRDM2-208ENST00000487453 TMEM189-UBE2V1I3L0A0 370 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 PPEF2O14830 753 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 GRM6O15303 877 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 STX10O60499 249 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 PIK3CAP42336 1068 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 AP3M2P53677 418 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 PLCB3Q01970 1234 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 GRIN2CQ14957 1233 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 FUT10Q6P4F1 479 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 DCLRE1AQ6PJP8 1040 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms