RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 FGFR3P22607 806 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 IGFBP6P24592 240 aaPredicted RBP14.3□□□□□ -0.12
SF1-216ENST00000486867 NRIP1P48552 1158 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 GLUD2P49448 558 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 AARSP49588 968 aaKnown RBP eCLIP14.3□□□□□ -0.12
SF1-216ENST00000486867 USP41Q3LFD5 358 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 LEXMQ3ZCV2 418 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 ARMCX5Q6P1M9 558 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 GPD1LQ8N335 351 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 GUF1Q8N442 669 aaKnown RBP14.3□□□□□ -0.12
SF1-216ENST00000486867 VN1R2Q8NFZ6 395 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 GOLGA5Q8TBA6 731 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 MICAL1Q8TDZ2 1067 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 PIK3R5Q8WYR1 880 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 KIF12Q96FN5 646 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 MSLNLQ96KJ4 702 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 KIAA1586Q9HCI6 787 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 DMAC2Q9NW81 257 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 FNIP2Q9P278 1114 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 TUBGCP4Q9UGJ1 667 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 SPTBN5Q9NRC6 3674 aaKnown RBP14.29□□□□□ -0.12
SF1-216ENST00000486867 CUL9Q8IWT3 2517 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 PODXLO00592 558 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 PDXKO00764 312 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 CLASP2O75122 1294 aaKnown RBP14.29□□□□□ -0.12
SF1-216ENST00000486867 TBX10O75333 385 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 TADA2AO75478 443 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 B3GAT3O94766 335 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 PAPLNO95428 1278 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 URODP06132 367 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 NFICP08651 508 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 PAX3P23760 479 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 WNT7BP56706 349 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 PNOCQ13519 176 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 MYBPC2Q14324 1141 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 TMEM132DQ14C87 1099 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 NFIL3Q16649 462 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 AAK1Q2M2I8 961 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 JADE1Q6IE81 842 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.29□□□□□ -0.12
SF1-216ENST00000486867 HS2ST1Q7LGA3 356 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 EFCAB13Q8IY85 973 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 SLC22A17Q8WUG5 538 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 RABGGTAQ92696 567 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 CCDC47Q96A33 483 aaKnown RBP14.29□□□□□ -0.12
SF1-216ENST00000486867 SAAL1Q96ER3 474 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 SUSD3Q96L08 255 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 FAM213AQ9BRX8 229 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.29□□□□□ -0.12
SF1-216ENST00000486867 MRPL17Q9NRX2 175 aaKnown RBP14.29□□□□□ -0.12
SF1-216ENST00000486867 HSPBP1Q9NZL4 362 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 CLEC1BQ9P126 229 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 BDP1A6H8Y1 2624 aa14.29□□□□□ -0.12
SF1-216ENST00000486867 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.28□□□□□ -0.12
SF1-216ENST00000486867 PIRO00625 290 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 LINC01565O15544 149 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 TRAPPC3O43617 180 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 CNPP09543 421 aaKnown RBP14.28□□□□□ -0.12
SF1-216ENST00000486867 MCCD1P59942 119 aaPredicted RBP14.28□□□□□ -0.12
SF1-216ENST00000486867 MRPS5P82675 430 aaKnown RBP14.28□□□□□ -0.12
SF1-216ENST00000486867 DLX2Q07687 328 aaPredicted RBP14.28□□□□□ -0.12
SF1-216ENST00000486867 ZCWPW2Q504Y3 356 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 PPFIBP1Q86W92 1011 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 NELFCDQ8IXH7 590 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 CXorf38Q8TB03 319 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 AUTS2Q8WXX7 1259 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 KLHL5Q96PQ7 755 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 ASB2Q96Q27 587 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 GTPBP4Q9BZE4 634 aaKnown RBP14.28□□□□□ -0.12
SF1-216ENST00000486867 PCIF1Q9H4Z3 704 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 C5orf42Q9H799 3197 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 RBAKQ9NYW8 714 aaPredicted RBP14.28□□□□□ -0.12
SF1-216ENST00000486867 TRAF3IP3Q9Y228 551 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 PCDHA5Q9Y5H7 936 aa14.28□□□□□ -0.12
SF1-216ENST00000486867 DOCK8Q8NF50 2099 aa14.27□□□□□ -0.12
SF1-216ENST00000486867 ZNF233A6NK53 670 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 M0QZQ0 153 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 SYN3O14994 580 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 PER2O15055 1255 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 TBC1D4O60343 1298 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 KINO60870 393 aaKnown RBP14.27□□□□□ -0.13
SF1-216ENST00000486867 KIF20AO95235 890 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 CREMQ03060 361 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 TFF2Q03403 129 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 SPAG1Q07617 926 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 MRPL58Q14197 206 aaKnown RBP14.27□□□□□ -0.13
SF1-216ENST00000486867 SKIV2LQ15477 1246 aaKnown RBP14.27□□□□□ -0.13
SF1-216ENST00000486867 SURF1Q15526 300 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 TPRNQ4KMQ1 711 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 RTP2Q5QGT7 225 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 FAM171A1Q5VUB5 890 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 PDXDC1Q6P996 788 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 CBWD2Q8IUF1 395 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 XXYLT1Q8NBI6 393 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 BEST2Q8NFU1 509 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 LNX1Q8TBB1 728 aaPredicted RBP14.27□□□□□ -0.13
SF1-216ENST00000486867 HASPINQ8TF76 798 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 TTPALQ9BTX7 342 aa14.27□□□□□ -0.13
SF1-216ENST00000486867 GZF1Q9H116 711 aaPredicted RBP14.27□□□□□ -0.13
SF1-216ENST00000486867 RMND1Q9NWS8 449 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms