RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 PUS7LQ9H0K6 701 aaKnown RBP6.16□□□□□ -1.42
COPS3-209ENST00000486810 CCDC8Q9H0W5 538 aaPredicted RBP6.16□□□□□ -1.42
COPS3-209ENST00000486810 SPATA7Q9P0W8 599 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 NCDNQ9UBB6 729 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 POLKQ9UBT6 870 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 CTNNA3Q9UI47 895 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 SCOCQ9UIL1 159 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 TMEM98Q9Y2Y6 226 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 TCAF1Q9Y4C2 921 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 KAT6BQ8WYB5 2073 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 NACADO15069 1562 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 PEG3Q9GZU2 1588 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 TRIM64CA6NLI5 447 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 TMEM110-MUSTN1A8MSY1 372 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 MUSKO15146 869 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 NPHP1O15259 732 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 ERLIN1O75477 346 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 KRT38O76015 456 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 SNUPNO95149 360 aaKnown RBP6.15□□□□□ -1.42
COPS3-209ENST00000486810 CASRP41180 1078 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 IARSP41252 1262 aaKnown RBP6.15□□□□□ -1.42
COPS3-209ENST00000486810 KLF1Q13351 362 aaPredicted RBP6.15□□□□□ -1.42
COPS3-209ENST00000486810 POSTNQ15063 836 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 PARP10Q53GL7 1025 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 CCDC186Q7Z3E2 898 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 LCA5Q86VQ0 697 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 TTC30AQ86WT1 665 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 LRRC49Q8IUZ0 686 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 D2HGDHQ8N465 521 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 IQUBQ8NA54 791 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 ZNF483Q8TF39 744 aaPredicted RBP6.15□□□□□ -1.42
COPS3-209ENST00000486810 AUTS2Q8WXX7 1259 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 TAF4BQ92750 862 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 CCDC34Q96HJ3 373 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 PDLIM2Q96JY6 352 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 PAGR1Q9BTK6 254 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 TLR9Q9NR96 1032 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 SPATS2LQ9NUQ6 558 aaKnown RBP6.15□□□□□ -1.42
COPS3-209ENST00000486810 MAP3K20Q9NYL2 800 aaKnown RBP6.15□□□□□ -1.42
COPS3-209ENST00000486810 TESMINQ9Y4I5 508 aa6.15□□□□□ -1.42
COPS3-209ENST00000486810 FZD9O00144 591 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 WNT10BO00744 389 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 KATNA1O75449 491 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 E2F6O75461 281 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 PECAM1P16284 738 aaPredicted RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 USP8P40818 1118 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 CLK1P49759 484 aaKnown RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 GUCY2FP51841 1108 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 IGBP1P78318 339 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 EIF2B5Q13144 721 aaKnown RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 PRPF4BQ13523 1007 aaKnown RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 CRYMQ14894 314 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 ADRM1Q16186 407 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 FAM214AQ32MH5 1076 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 PREPLQ4J6C6 727 aaPredicted RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 NAIF1Q69YI7 327 aaPredicted RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 TTC19Q6DKK2 380 aaPredicted RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 SPRED1Q7Z699 444 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 KRT77Q7Z794 578 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 TEX11Q8IYF3 940 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 GLB1L3Q8NCI6 653 aaPredicted RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 SNX33Q8WV41 574 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 DNAAF4Q8WXU2 420 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 PPM1EQ8WY54 764 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 CDK5RAP3Q96JB5 506 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 CDC5LQ99459 802 aaKnown RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 BAG1Q99933 345 aaPredicted RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 MENTQ9BUN1 341 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 MAK16Q9BXY0 300 aaKnown RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 DNAJC28Q9NX36 388 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 CLIP2Q9UDT6 1046 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 RCAN3Q9UKA8 241 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 ACAD8Q9UKU7 415 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 ITM2BQ9Y287 266 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 SOS1Q07889 1333 aaPredicted RBP6.14□□□□□ -1.43
COPS3-209ENST00000486810 CGNL1Q0VF96 1302 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 NPC1L1Q9UHC9 1359 aa6.14□□□□□ -1.43
COPS3-209ENST00000486810 WRNQ14191 1432 aaPredicted RBP eCLIP6.14□□□□□ -1.43
COPS3-209ENST00000486810 TRIM75PA6NK02 468 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 GABRDO14764 452 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 MTA2O94776 668 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 OSMP13725 252 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 INSRRP14616 1297 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 U2AF2P26368 475 aaKnown RBP eCLIP6.13□□□□□ -1.43
COPS3-209ENST00000486810 MAN1A1P33908 653 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 MEF2AQ02078 507 aaPredicted RBP6.13□□□□□ -1.43
COPS3-209ENST00000486810 PPP3CAQ08209 521 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 C19orf54Q5BKX5 351 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 FKBP15Q5T1M5 1219 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 LCE5AQ5TCM9 118 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 SFMBT2Q5VUG0 894 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 C1QL3Q5VWW1 255 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 CCDC174Q6PII3 467 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 ZNF512Q96ME7 567 aaPredicted RBP6.13□□□□□ -1.43
COPS3-209ENST00000486810 MPHOSPH9Q99550 1183 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 GPR20Q99678 358 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 NACA2Q9H009 215 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 DIAPH3Q9NSV4 1193 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms