RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 KIF12Q96FN5 646 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 FAM213AQ9BRX8 229 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 GTPBP4Q9BZE4 634 aaKnown RBP19.31■□□□□ 0.68
SREBF1-213ENST00000485080 KCTD10Q9H3F6 313 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 GOLGA2P5Q9HBQ8 144 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 PRDM6Q9NQX0 595 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 MRPL17Q9NRX2 175 aaKnown RBP19.31■□□□□ 0.68
SREBF1-213ENST00000485080 RMND1Q9NWS8 449 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 HSPBP1Q9NZL4 362 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 CACNG4Q9UBN1 327 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 ANK1P16157 1881 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 PODXLO00592 558 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 TRAPPC3O43617 180 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 SMC2O95347 1197 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 URODP06132 367 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 LTBRP36941 435 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 GLUD2P49448 558 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 PNOCQ13519 176 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 MYBPC2Q14324 1141 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 AAK1Q2M2I8 961 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 JADE1Q6IE81 842 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 SLC9A9Q8IVB4 645 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 GUF1Q8N442 669 aaKnown RBP19.3■□□□□ 0.68
SREBF1-213ENST00000485080 RABGGTAQ92696 567 aa19.3■□□□□ 0.68
SREBF1-213ENST00000485080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.3■□□□□ 0.68
SREBF1-213ENST00000485080 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.29■□□□□ 0.68
SREBF1-213ENST00000485080 ZNF233A6NK53 670 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 PDXKO00764 312 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 FGFR3P22607 806 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 GTF2F1P35269 517 aaKnown RBP eCLIP19.29■□□□□ 0.68
SREBF1-213ENST00000485080 MRPS5P82675 430 aaKnown RBP19.29■□□□□ 0.68
SREBF1-213ENST00000485080 CREMQ03060 361 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 TMEM132DQ14C87 1099 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 COBLL1Q53SF7 1204 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 PDXDC1Q6P996 788 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.29■□□□□ 0.68
SREBF1-213ENST00000485080 PPFIBP1Q86W92 1011 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 NELFCDQ8IXH7 590 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 C3orf58Q8NDZ4 430 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 ZSWIM2Q8NEG5 633 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 BEST2Q8NFU1 509 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 SAAL1Q96ER3 474 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 EMILIN2Q9BXX0 1053 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 DMAC2Q9NW81 257 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 RBAKQ9NYW8 714 aaPredicted RBP19.29■□□□□ 0.68
SREBF1-213ENST00000485080 FNIP2Q9P278 1114 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 TUBGCP4Q9UGJ1 667 aa19.29■□□□□ 0.68
SREBF1-213ENST00000485080 PER2O15055 1255 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 CLASP2O75122 1294 aaKnown RBP19.28■□□□□ 0.68
SREBF1-213ENST00000485080 CSPG5O95196 566 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 NFICP08651 508 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 AARSP49588 968 aaKnown RBP eCLIP19.28■□□□□ 0.68
SREBF1-213ENST00000485080 SURF1Q15526 300 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 NFIL3Q16649 462 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 LEXMQ3ZCV2 418 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 FAM171A1Q5VUB5 890 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 KIAA1841Q6NSI8 718 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 RBM23Q86U06 439 aaKnown RBP19.28■□□□□ 0.68
SREBF1-213ENST00000485080 XXYLT1Q8NBI6 393 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 AUTS2Q8WXX7 1259 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 PIK3R5Q8WYR1 880 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 TTPALQ9BTX7 342 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 PCIF1Q9H4Z3 704 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 CLDND1Q9NY35 253 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 TRAF3IP3Q9Y228 551 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 PCDHA5Q9Y5H7 936 aa19.28■□□□□ 0.68
SREBF1-213ENST00000485080 ANO9A1A5B4 782 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 SYN3O14994 580 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 PRPF40AO75400 957 aaKnown RBP19.27■□□□□ 0.68
SREBF1-213ENST00000485080 GLP2RO95838 553 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 CNPP09543 421 aaKnown RBP19.27■□□□□ 0.68
SREBF1-213ENST00000485080 IGFBP6P24592 240 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-213ENST00000485080 SPAG1Q07617 926 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 EFCAB13Q8IY85 973 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 VN1R2Q8NFZ6 395 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 HASPINQ8TF76 798 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 SLC22A17Q8WUG5 538 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 FAM212AQ96EL1 285 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 MSLNLQ96KJ4 702 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 SUSD3Q96L08 255 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 KLHL5Q96PQ7 755 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 ASB2Q96Q27 587 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 IGFLR1Q9H665 355 aa19.27■□□□□ 0.68
SREBF1-213ENST00000485080 GOLGA8IPA6NC78 632 aa19.26■□□□□ 0.67
SREBF1-213ENST00000485080 GOLGA8JA6NMD2 632 aa19.26■□□□□ 0.67
SREBF1-213ENST00000485080 PIRO00625 290 aa19.26■□□□□ 0.67
SREBF1-213ENST00000485080 CLIC2O15247 247 aa19.26■□□□□ 0.67
SREBF1-213ENST00000485080 LINC01565O15544 149 aa19.26■□□□□ 0.67
SREBF1-213ENST00000485080 TBX10O75333 385 aa19.26■□□□□ 0.67
SREBF1-213ENST00000485080 SRGAP2BP0DMP2 458 aa19.26■□□□□ 0.67
SREBF1-213ENST00000485080 KCNA5P22460 613 aa19.26■□□□□ 0.67
SREBF1-213ENST00000485080 SNRNP35Q16560 246 aaKnown RBP19.26■□□□□ 0.67
SREBF1-213ENST00000485080 PUS10Q3MIT2 529 aaKnown RBP19.26■□□□□ 0.67
SREBF1-213ENST00000485080 RTP2Q5QGT7 225 aa19.26■□□□□ 0.67
SREBF1-213ENST00000485080 ZNF658Q5TYW1 1059 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-213ENST00000485080 CBWD2Q8IUF1 395 aa19.26■□□□□ 0.67
SREBF1-213ENST00000485080 LNX1Q8TBB1 728 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-213ENST00000485080 CACTINQ8WUQ7 758 aaKnown RBP19.26■□□□□ 0.67
SREBF1-213ENST00000485080 SMARCE1Q969G3 411 aa19.26■□□□□ 0.67
SREBF1-213ENST00000485080 CLEC1BQ9P126 229 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms