RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 MCF2P10911 925 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 DNA2P51530 1060 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 RGMBQ6NW40 437 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 THNSL1Q8IYQ7 743 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 LRRC1Q9BTT6 524 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 IMPG2Q9BZV3 1241 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
CPNE1-225ENST00000483495 CTTNBP2NLQ9P2B4 639 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 UVRAGQ9P2Y5 699 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 TTC7AQ9ULT0 858 aaPredicted RBP14.19□□□□□ -0.14
CPNE1-225ENST00000483495 UMODL1Q5DID0 1318 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 RRN3P2A6NIE6 340 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 GPR25O00155 361 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 VTNP04004 478 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 CYP1A1P04798 512 aaPredicted RBP14.18□□□□□ -0.14
CPNE1-225ENST00000483495 SLC10A3P09131 477 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 ZNF865P0CJ78 1059 aaPredicted RBP14.18□□□□□ -0.14
CPNE1-225ENST00000483495 ZNF132P52740 706 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 INHBEP58166 350 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 SGSM1Q2NKQ1 1148 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 OLFML2BQ68BL8 750 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 SCARA3Q6AZY7 606 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 ZNF410Q86VK4 478 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 IFNL1Q8IU54 200 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 EFCAB13Q8IY85 973 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 KIAA0319LQ8IZA0 1049 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 RPS6KC1Q96S38 1066 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.18□□□□□ -0.146e-13■■■■■ 69.9
CPNE1-225ENST00000483495 PDZD7Q9H5P4 517 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 FLRT1Q9NZU1 646 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 PGRMC1O00264 195 aaKnown RBP14.18□□□□□ -0.14
CPNE1-225ENST00000483495 F2P00734 622 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 KYAT1Q16773 422 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 TMEM132AQ24JP5 1023 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 CCNI2Q6ZMN8 369 aaPredicted RBP14.18□□□□□ -0.14
CPNE1-225ENST00000483495 TRIM72Q6ZMU5 477 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 KRT222Q8N1A0 295 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 CEP120Q8N960 986 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 RPF1Q9H9Y2 349 aaKnown RBP14.18□□□□□ -0.14
CPNE1-225ENST00000483495 PCDHB4Q9Y5E5 795 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 ALG6Q9Y672 507 aa14.18□□□□□ -0.14
CPNE1-225ENST00000483495 MIF4GDA9UHW6 222 aaKnown RBP14.17□□□□□ -0.14
CPNE1-225ENST00000483495 DYNC1LI2O43237 492 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-225ENST00000483495 CEP104O60308 925 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 TMEM191BP0C7N4 346 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 ARF4P18085 180 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-225ENST00000483495 MYL6P60660 151 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 CENPCQ03188 943 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 MAP9Q49MG5 647 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 PRAMEF19Q5SWL8 479 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 TMEM270Q6UE05 265 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 RBBP8NLQ8NC74 664 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-225ENST00000483495 ZNF653Q96CK0 615 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 FAM212AQ96EL1 285 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 FAXDC2Q96IV6 333 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 ANKRD36BP1Q96IX9 119 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 NIF3L1Q9GZT8 377 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 XYLT2Q9H1B5 865 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 CARD9Q9H257 536 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 AVENQ9NQS1 362 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-225ENST00000483495 DMGDHQ9UI17 866 aaKnown RBP14.17□□□□□ -0.14
CPNE1-225ENST00000483495 EVPLQ92817 2033 aa14.17□□□□□ -0.14
CPNE1-225ENST00000483495 CALCAP01258 141 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 TNNC2P02585 160 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 CXCL8P10145 99 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 MYBL1P10243 752 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 TNFRSF8P28908 595 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 PLA2G4AP47712 749 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 TFAMQ00059 246 aaKnown RBP14.16□□□□□ -0.14
CPNE1-225ENST00000483495 CDC42EP1Q00587 391 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 PTPROQ16827 1216 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 C8orf74Q6P047 294 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 HDXQ7Z353 690 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 CDR2LQ86X02 465 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-225ENST00000483495 TMEM192Q8IY95 271 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 MCOLN2Q8IZK6 566 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 ZNF564Q8TBZ8 553 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-225ENST00000483495 HDAC7Q8WUI4 952 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 NLRP7Q8WX94 980 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 KAT2BQ92831 832 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 TRIM11Q96F44 468 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 NUP85Q9BW27 656 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 UBXN6Q9BZV1 441 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 STIM2Q9P246 746 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 GJD2Q9UKL4 321 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 Q9Y3F1 56 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 NOC2LQ9Y3T9 749 aaKnown RBP14.16□□□□□ -0.14
CPNE1-225ENST00000483495 NRCAMQ92823 1304 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 PASKQ96RG2 1323 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 A0A1B0GUA9 196 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 MBLAC1A4D2B0 266 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-225ENST00000483495 MEFVO15553 781 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-225ENST00000483495 TSPAN1O60635 241 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 CSDE1O75534 798 aaKnown RBP14.16□□□□□ -0.14
CPNE1-225ENST00000483495 STAG3L1P0CL83 205 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 GNA15P30679 374 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 RGS2P41220 211 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 OSTNP61366 133 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 TNNC1P63316 161 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms