RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 LILRB3O75022 631 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 SRGAP2BP0DMP2 458 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 PAX3P23760 479 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 CREMQ03060 361 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 SPAG1Q07617 926 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 ADAM15Q13444 863 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 SURF1Q15526 300 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 KIAA0319Q5VV43 1072 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 SPATA1Q5VX52 437 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 JADE1Q6IE81 842 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 PDXDC1Q6P996 788 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 TAS1R1Q7RTX1 841 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 PPFIBP1Q86W92 1011 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 HASPINQ8TF76 798 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 TMEM174Q8WUU8 243 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 SMARCE1Q969G3 411 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 FBXL18Q96ME1 805 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 GBP4Q96PP9 640 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 PRDM6Q9NQX0 595 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18■□□□□ 0.47
HMGN1-214ENST00000482733 TUBGCP4Q9UGJ1 667 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 PLXNA4Q9HCM2 1894 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 TDRD15B5MCY1 1934 aaKnown RBP18■□□□□ 0.47
HMGN1-214ENST00000482733 GOLGA8IPA6NC78 632 aa17.99■□□□□ 0.47
HMGN1-214ENST00000482733 GOLGA8JA6NMD2 632 aa17.99■□□□□ 0.47
HMGN1-214ENST00000482733 PDXKO00764 312 aa17.99■□□□□ 0.47
HMGN1-214ENST00000482733 MRPS5P82675 430 aaKnown RBP17.99■□□□□ 0.47
HMGN1-214ENST00000482733 FAM171A1Q5VUB5 890 aa17.99■□□□□ 0.47
HMGN1-214ENST00000482733 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.99■□□□□ 0.47
HMGN1-214ENST00000482733 GUF1Q8N442 669 aaKnown RBP17.99■□□□□ 0.47
HMGN1-214ENST00000482733 XXYLT1Q8NBI6 393 aa17.99■□□□□ 0.47
HMGN1-214ENST00000482733 SPATA20Q8TB22 786 aa17.99■□□□□ 0.47
HMGN1-214ENST00000482733 NOC3LQ8WTT2 800 aaKnown RBP17.99■□□□□ 0.47
HMGN1-214ENST00000482733 AUTS2Q8WXX7 1259 aa17.99■□□□□ 0.47
HMGN1-214ENST00000482733 TTPALQ9BTX7 342 aa17.99■□□□□ 0.47
HMGN1-214ENST00000482733 RXFP1Q9HBX9 757 aa17.99■□□□□ 0.47
HMGN1-214ENST00000482733 NUB1Q9Y5A7 615 aa17.99■□□□□ 0.47
HMGN1-214ENST00000482733 CLIC2O15247 247 aa17.98■□□□□ 0.47
HMGN1-214ENST00000482733 CLASP2O75122 1294 aaKnown RBP17.98■□□□□ 0.47
HMGN1-214ENST00000482733 NFICP08651 508 aa17.98■□□□□ 0.47
HMGN1-214ENST00000482733 GTF2F1P35269 517 aaKnown RBP eCLIP17.98■□□□□ 0.47
HMGN1-214ENST00000482733 MYBPC2Q14324 1141 aa17.98■□□□□ 0.47
HMGN1-214ENST00000482733 CD300LGQ6UXG3 332 aa17.98■□□□□ 0.47
HMGN1-214ENST00000482733 TMEM184AQ6ZMB5 413 aa17.98■□□□□ 0.47
HMGN1-214ENST00000482733 EP400NLQ6ZTU2 488 aa17.98■□□□□ 0.47
HMGN1-214ENST00000482733 C3orf58Q8NDZ4 430 aa17.98■□□□□ 0.47
HMGN1-214ENST00000482733 ZSWIM2Q8NEG5 633 aa17.98■□□□□ 0.47
HMGN1-214ENST00000482733 CACTINQ8WUQ7 758 aaKnown RBP17.98■□□□□ 0.47
HMGN1-214ENST00000482733 KCTD10Q9H3F6 313 aa17.98■□□□□ 0.47
HMGN1-214ENST00000482733 PCDHA5Q9Y5H7 936 aa17.98■□□□□ 0.47
HMGN1-214ENST00000482733 PRUNE2Q8WUY3 3088 aa17.98■□□□□ 0.47
HMGN1-214ENST00000482733 C2CD2LO14523 706 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 CALUO43852 315 aaPredicted RBP17.97■□□□□ 0.47
HMGN1-214ENST00000482733 C1RP00736 705 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 ADH1AP07327 375 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 KCNA5P22460 613 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 FGFR3P22607 806 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 NDUFV1P49821 464 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 CYP2J2P51589 502 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 SNRNP35Q16560 246 aaKnown RBP17.97■□□□□ 0.47
HMGN1-214ENST00000482733 PUS10Q3MIT2 529 aaKnown RBP17.97■□□□□ 0.47
HMGN1-214ENST00000482733 LEXMQ3ZCV2 418 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 ZNF658Q5TYW1 1059 aaPredicted RBP17.97■□□□□ 0.47
HMGN1-214ENST00000482733 CBWD2Q8IUF1 395 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 SLC9A9Q8IVB4 645 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 RIN2Q8WYP3 895 aaPredicted RBP17.97■□□□□ 0.47
HMGN1-214ENST00000482733 PIK3R5Q8WYR1 880 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 CASP10Q92851 521 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 KLHL5Q96PQ7 755 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 FNIP2Q9P278 1114 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 TRAF3IP3Q9Y228 551 aa17.97■□□□□ 0.47
HMGN1-214ENST00000482733 SYN3O14994 580 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 LINC01565O15544 149 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 EXOC3O60645 756 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 CNPP09543 421 aaKnown RBP17.96■□□□□ 0.47
HMGN1-214ENST00000482733 KLRC2P26717 231 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 MCM4P33991 863 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 LTBRP36941 435 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 KCNC3Q14003 757 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 COBLL1Q53SF7 1204 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 RTP2Q5QGT7 225 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 CEP57Q86XR8 500 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 ASB2Q96Q27 587 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 DPP3Q9NY33 737 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 HCFC2Q9Y5Z7 792 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 REV3LO60673 3130 aa17.96■□□□□ 0.47
HMGN1-214ENST00000482733 SPTBN5Q9NRC6 3674 aaKnown RBP17.95■□□□□ 0.46
HMGN1-214ENST00000482733 GOLGA6L22H0YM25 854 aa17.95■□□□□ 0.46
HMGN1-214ENST00000482733 TULP1O00294 542 aaPredicted RBP17.95■□□□□ 0.46
HMGN1-214ENST00000482733 TEX28O15482 410 aa17.95■□□□□ 0.46
HMGN1-214ENST00000482733 BRCC3P46736 316 aa17.95■□□□□ 0.46
HMGN1-214ENST00000482733 TFAMQ00059 246 aaKnown RBP17.95■□□□□ 0.46
HMGN1-214ENST00000482733 TFF2Q03403 129 aa17.95■□□□□ 0.46
HMGN1-214ENST00000482733 PSMD5Q16401 504 aa17.95■□□□□ 0.46
HMGN1-214ENST00000482733 NFIL3Q16649 462 aa17.95■□□□□ 0.46
HMGN1-214ENST00000482733 C9orf57Q5W0N0 161 aa17.95■□□□□ 0.46
HMGN1-214ENST00000482733 ELMSAN1Q6PJG2 1045 aa17.95■□□□□ 0.46
HMGN1-214ENST00000482733 ANKS3Q6ZW76 656 aa17.95■□□□□ 0.46
HMGN1-214ENST00000482733 EFCAB13Q8IY85 973 aa17.95■□□□□ 0.46
HMGN1-214ENST00000482733 APPL2Q8NEU8 664 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms