RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 RHOBTB3O94955 611 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 KIF4AO95239 1232 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 THP07101 528 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 ADRB2P07550 413 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 NFICP08651 508 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 CLTAP09496 248 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 KCNE1P15382 129 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 SSTR3P32745 418 aaPredicted RBP11.52□□□□□ -0.57
SSBP1-210ENST00000481508 ALDH7A1P49419 539 aaKnown RBP11.52□□□□□ -0.57
SSBP1-210ENST00000481508 YARSP54577 528 aaKnown RBP11.52□□□□□ -0.57
SSBP1-210ENST00000481508 UBE2HP62256 183 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 TUSC3Q13454 348 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 CSPP1Q1MSJ5 1256 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 PLPP4Q5VZY2 271 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 SCARA3Q6AZY7 606 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 APBB1IPQ7Z5R6 666 aaPredicted RBP11.52□□□□□ -0.57
SSBP1-210ENST00000481508 RNF168Q8IYW5 571 aaPredicted RBP11.52□□□□□ -0.57
SSBP1-210ENST00000481508 SYCP3Q8IZU3 236 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 C3orf58Q8NDZ4 430 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 RSPH1Q8WYR4 309 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 B3GALT6Q96L58 329 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 FAM193BQ96PV7 902 aaPredicted RBP11.52□□□□□ -0.57
SSBP1-210ENST00000481508 FAM213AQ9BRX8 229 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 AGPAT3Q9NRZ7 376 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 AGO2Q9UKV8 859 aaKnown RBP11.52□□□□□ -0.57
SSBP1-210ENST00000481508 EXOC7Q9UPT5 735 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 FAN1Q9Y2M0 1017 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 UBE4BO95155 1302 aa11.52□□□□□ -0.57
SSBP1-210ENST00000481508 HIDE1A8MVS5 230 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 PPEF2O14830 753 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 CLIC2O15247 247 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 MYL1P05976 194 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 IL9P15248 144 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 ABCD1P33897 745 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 PPM1AP35813 382 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 CLCNKBP51801 687 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 RBM10P98175 930 aaKnown RBP11.51□□□□□ -0.57
SSBP1-210ENST00000481508 JADE1Q6IE81 842 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 SLFN12LQ6IEE8 588 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 ARMCX5Q6P1M9 558 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 HFE2Q6ZVN8 426 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 DDX53Q86TM3 631 aaKnown RBP11.51□□□□□ -0.57
SSBP1-210ENST00000481508 EFCAB13Q8IY85 973 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 GJD3Q8N144 294 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 PRSS33Q8NF86 280 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 TMEM169Q96HH4 297 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 TIGD1Q96MW7 591 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 GPR62Q9BZJ7 368 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 LMAN2LQ9H0V9 348 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 ZBP1Q9H171 429 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 KCTD10Q9H3F6 313 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 TMEM206Q9H813 350 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 RPF1Q9H9Y2 349 aaKnown RBP11.51□□□□□ -0.57
SSBP1-210ENST00000481508 TLR9Q9NR96 1032 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 TOPORSQ9NS56 1045 aaPredicted RBP11.51□□□□□ -0.57
SSBP1-210ENST00000481508 LMBRD1Q9NUN5 540 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 LMCD1Q9NZU5 365 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 MAPK8IP1Q9UQF2 711 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 PCDHA5Q9Y5H7 936 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 DMXL1Q9Y485 3027 aa11.51□□□□□ -0.57
SSBP1-210ENST00000481508 TPRP12270 2363 aaKnown RBP11.5□□□□□ -0.57
SSBP1-210ENST00000481508 GVINP1Q7Z2Y8 2422 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 BAHCC1Q9P281 2608 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 PER2O15055 1255 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 LINC01565O15544 149 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 ALDH2P05091 517 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 GARTP22102 1010 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 UBE3AQ05086 875 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 HYAL1Q12794 435 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 HSP90AA2PQ14568 343 aaPredicted RBP11.5□□□□□ -0.57
SSBP1-210ENST00000481508 KCNB1Q14721 858 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 ZBTB6Q15916 424 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 PTPROQ16827 1216 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 ISM2Q6H9L7 571 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 FUT10Q6P4F1 479 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 STXBP4Q6ZWJ1 553 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 CBWD2Q8IUF1 395 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 SPNS2Q8IVW8 549 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 VPS52Q8N1B4 723 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 VN1R2Q8NFZ6 395 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 SPATA20Q8TB22 786 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 NOC3LQ8WTT2 800 aaKnown RBP11.5□□□□□ -0.57
SSBP1-210ENST00000481508 TCF25Q9BQ70 676 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 HERC2P3Q9BVR0 1158 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 NSUN3Q9H649 340 aaKnown RBP11.5□□□□□ -0.57
SSBP1-210ENST00000481508 HSPBP1Q9NZL4 362 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 MAN1B1Q9UKM7 699 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 LZTS1Q9Y250 596 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 PTPRJQ12913 1337 aa11.5□□□□□ -0.57
SSBP1-210ENST00000481508 MTCL1Q9Y4B5 1905 aaKnown RBP11.5□□□□□ -0.57
SSBP1-210ENST00000481508 DNAH14Q0VDD8 3507 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 C2orf71A6NGG8 1288 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 I3L4J1 428 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 STK25O00506 426 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 PODXLO00592 558 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 EXTL3O43909 919 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 KINO60870 393 aaKnown RBP11.49□□□□□ -0.57
SSBP1-210ENST00000481508 BMP6P22004 513 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 BRCC3P46736 316 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 CYP2J2P51589 502 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms