RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 CDC14BO60729 498 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 CR2P20023 1033 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 PRIM2P49643 509 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 EPHB4P54760 987 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 AK2P54819 239 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 XRRA1Q6P2D8 792 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 XYLT1Q86Y38 959 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 LGI4Q8N135 537 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 BORCS6Q96GS4 357 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 LMF1Q96S06 567 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 PSMD1Q99460 953 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 NDC1Q9BTX1 674 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 LSM14BQ9BX40 385 aaKnown RBP6.46□□□□□ -1.38
UPF3A-207ENST00000481131 PLA2G12BQ9BX93 195 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 NUP62CLQ9H1M0 184 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 SEC61A2Q9H9S3 476 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 TPCN1Q9ULQ1 816 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 DAAM1Q9Y4D1 1078 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 A0A1W2PPL8 197 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 TBX3O15119 743 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 MATN4O95460 622 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 ATP5JP18859 108 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 PIK3CGP48736 1102 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 OS9Q13438 667 aaPredicted RBP6.45□□□□□ -1.38
UPF3A-207ENST00000481131 MORC3Q14149 939 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 VPS72Q15906 364 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 PABPC1LQ4VXU2 614 aaKnown RBP6.45□□□□□ -1.38
UPF3A-207ENST00000481131 KHDC1LQ5JSQ8 128 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 ARHGEF18Q6ZSZ5 1173 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 TOGARAM2Q6ZUX3 1019 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 PLEKHH3Q7Z736 793 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 SRLQ86TD4 932 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 IL17RDQ8NFM7 739 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 MORC4Q8TE76 937 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 PHKBQ93100 1093 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 ZNF512Q96ME7 567 aaPredicted RBP6.45□□□□□ -1.38
UPF3A-207ENST00000481131 ARPC5LQ9BPX5 153 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 LRRC27Q9C0I9 530 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 BTBD1Q9H0C5 482 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 FBXO34Q9NWN3 711 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 SIDT1Q9NXL6 827 aaKnown RBP6.45□□□□□ -1.38
UPF3A-207ENST00000481131 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.45□□□□□ -1.38
UPF3A-207ENST00000481131 CORO2BQ9UQ03 480 aa6.45□□□□□ -1.38
UPF3A-207ENST00000481131 PLEKHD1A6NEE1 506 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 PJA2O43164 708 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 INHBBP09529 407 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 ZKSCAN1P17029 563 aaPredicted RBP6.44□□□□□ -1.38
UPF3A-207ENST00000481131 HDCP19113 662 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 SLC7A1P30825 629 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 CASP5P51878 434 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 FMO1Q01740 532 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 PTH1RQ03431 593 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 EXOSC9Q06265 439 aaKnown RBP6.44□□□□□ -1.38
UPF3A-207ENST00000481131 BMT2Q1RMZ1 405 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 CCDC93Q567U6 631 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 C10orf62Q5T681 223 aaPredicted RBP6.44□□□□□ -1.38
UPF3A-207ENST00000481131 EMC10Q5UCC4 262 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 ZNF529Q6P280 563 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 FAM111BQ6SJ93 734 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 GPRIN1Q7Z2K8 1008 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 UBE3BQ7Z3V4 1068 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 SP8Q8IXZ3 490 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 EXOC8Q8IYI6 725 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 BRIX1Q8TDN6 353 aaKnown RBP6.44□□□□□ -1.38
UPF3A-207ENST00000481131 TNPO1Q92973 898 aaKnown RBP6.44□□□□□ -1.38
UPF3A-207ENST00000481131 ARL8AQ96BM9 186 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 TMEM176AQ96HP8 235 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 GNRHR2Q96P88 292 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 P2RX7Q99572 595 aaKnown RBP6.44□□□□□ -1.38
UPF3A-207ENST00000481131 MYD88Q99836 296 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 ADAM7Q9H2U9 754 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 SARS2Q9NP81 518 aaKnown RBP6.44□□□□□ -1.38
UPF3A-207ENST00000481131 STK32BQ9NY57 414 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 CPNE7Q9UBL6 633 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 SLC45A2Q9UMX9 530 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 CCDC88BA6NC98 1476 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 LAMC3Q9Y6N6 1575 aa6.44□□□□□ -1.38
UPF3A-207ENST00000481131 LOC102724159A0A0B4J2E5 919 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 RHPN2P1A8MT19 583 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 KIAA0391O15091 583 aaKnown RBP6.43□□□□□ -1.38
UPF3A-207ENST00000481131 KPNA5O15131 536 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 SLC43A1O75387 559 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 PHKA1P46020 1223 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 ARFIP2P53365 341 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 SOX8P57073 446 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 RAP2BP61225 183 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 CREMQ03060 361 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 PWP2Q15269 919 aaKnown RBP6.43□□□□□ -1.38
UPF3A-207ENST00000481131 FKBP15Q5T1M5 1219 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 TTLL10Q6ZVT0 673 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 TAX1BP1Q86VP1 789 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 SESTD1Q86VW0 696 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 SKAP1Q86WV1 359 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 FAM186BQ8IYM0 893 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 PGBD4Q96DM1 585 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 SGCZQ96LD1 299 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 C20orf173Q96LM9 149 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 TRIM54Q9BYV2 358 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 CPEB1Q9BZB8 566 aaKnown RBP6.43□□□□□ -1.38
UPF3A-207ENST00000481131 NELFAQ9H3P2 528 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms