RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 POFUT1Q9H488 388 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 TMEM8AQ9HCN3 771 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 SEPT11Q9NVA2 429 aaKnown RBP8.89□□□□□ -0.99
LSM5-210ENST00000480956 CLCA2Q9UQC9 943 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 CYP46A1Q9Y6A2 500 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 SRGAP2O75044 1071 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 ATP5BP06576 529 aaKnown RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 ABCD3P28288 659 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 DPP6P42658 865 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 AARSP49588 968 aaKnown RBP eCLIP8.88□□□□□ -0.99
LSM5-210ENST00000480956 LSAMPQ13449 338 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 TUSC3Q13454 348 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 SPIDRQ14159 915 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 SF3B3Q15393 1217 aaKnown RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 MCTP2Q6DN12 878 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 GPAT2Q6NUI2 795 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 BBS12Q6ZW61 710 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 CPLX4Q7Z7G2 160 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 GATAD2AQ86YP4 633 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 SH2D3CQ8N5H7 860 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 TMCO5AQ8N6Q1 288 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 GDAP1Q8TB36 358 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 DLG3Q92796 817 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 FAM120BQ96EK7 910 aaKnown RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 FAM167AQ96KS9 214 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 PRDM12Q9H4Q4 367 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 INCENPQ9NQS7 918 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 CRIM1Q9NZV1 1036 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 FRRS1LQ9P0K9 344 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 MOSPD1Q9UJG1 213 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 ZNF215Q9UL58 517 aaPredicted RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 PCDHB1Q9Y5F3 818 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 LINC01387J3KSC0 135 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 KIAA0355O15063 1070 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 IPO8O15397 1037 aaKnown RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 QDPRP09417 244 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 EN2P19622 333 aaPredicted RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 MCM2P49736 904 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 CSE1LP55060 971 aaKnown RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 RPS16P62249 146 aaKnown RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 KRT76Q01546 638 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 IL1RL1Q01638 556 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 STK4Q13043 487 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 COG2Q14746 738 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 INF2Q27J81 1249 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 RAB12Q6IQ22 244 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 USP51Q70EK9 711 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 SZRD1Q7Z422 152 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 HEATR3Q7Z4Q2 680 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 TMC3Q7Z5M5 1100 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 THAP5Q7Z6K1 395 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 EGFL6Q8IUX8 553 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 PHYKPLQ8IUZ5 450 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 C3orf20Q8ND61 904 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 TBC1D22AQ8WUA7 517 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 ZNF837Q96EG3 531 aaPredicted RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 NEIL1Q96FI4 390 aaPredicted RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 FCRL3Q96P31 734 aaPredicted RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 FANCD2OSQ96PS1 177 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 MMP19Q99542 508 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 JAM3Q9BX67 310 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 VPS33BQ9H267 617 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 CDIP1Q9H305 208 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 RNPEPQ9H4A4 650 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 TAF1DQ9H5J8 278 aaPredicted RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 PNPOQ9NVS9 261 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 CHORDC1Q9UHD1 332 aaPredicted RBP8.88□□□□□ -0.99
LSM5-210ENST00000480956 MINPP1Q9UNW1 487 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 IRS2Q9Y4H2 1338 aa8.88□□□□□ -0.99
LSM5-210ENST00000480956 TCRBV5S4A2TA0A5A2 114 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 CLCA1A8K7I4 914 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 F8W031 263 aaPredicted RBP8.87□□□□□ -0.99
LSM5-210ENST00000480956 MAN2B1O00754 1011 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 NDC80O14777 642 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 AKR1B10O60218 316 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 DGKIO75912 1065 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 WFS1O76024 890 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 TK1P04183 234 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 HSPA1AP0DMV8 641 aaKnown RBP8.87□□□□□ -0.99
LSM5-210ENST00000480956 HSPA1BP0DMV9 641 aaKnown RBP8.87□□□□□ -0.99
LSM5-210ENST00000480956 CCT4P50991 539 aaKnown RBP8.87□□□□□ -0.99
LSM5-210ENST00000480956 POLR2FP61218 127 aaKnown RBP8.87□□□□□ -0.99
LSM5-210ENST00000480956 DLG4P78352 724 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 ADCY2Q08462 1091 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 TTLL4Q14679 1199 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 FLYWCH1Q4VC44 716 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 ARHGAP15Q53QZ3 475 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 FAM182BQ5T319 152 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 CRTC3Q6UUV7 619 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 NUP54Q7Z3B4 507 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 SYT9Q86SS6 491 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 KLHL23Q8NBE8 558 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 WHAMMQ8TF30 809 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 TBC1D5Q92609 795 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 KIF1BPQ96EK5 621 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 LRRC46Q96FV0 321 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 RBM18Q96H35 190 aaKnown RBP8.87□□□□□ -0.99
LSM5-210ENST00000480956 PRPF18Q99633 342 aaKnown RBP8.87□□□□□ -0.99
LSM5-210ENST00000480956 GDF15Q99988 308 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 ITPAQ9BY32 194 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms