RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 REXO2Q9Y3B8 237 aaKnown RBP6.74□□□□□ -1.33
CALD1-219ENST00000480638 GAGE12BA1L429 117 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 GAGE12HA6NDE8 117 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 RNASET2O00584 256 aaKnown RBP6.73□□□□□ -1.33
CALD1-219ENST00000480638 SLC16A6O15403 523 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 FZD7O75084 574 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 FTLP02792 175 aaPredicted RBP6.73□□□□□ -1.33
CALD1-219ENST00000480638 MTHFD1P11586 935 aaKnown RBP6.73□□□□□ -1.33
CALD1-219ENST00000480638 MALP21145 153 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 SNAPC2Q13487 334 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 BEAN1Q3B7T3 259 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 ATAT1Q5SQI0 421 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 SLC4A10Q6U841 1118 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 LRRC55Q6ZSA7 311 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 RHOUQ7L0Q8 258 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 FITM2Q8N6M3 262 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 C3orf20Q8ND61 904 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 HPS3Q969F9 1004 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 LENG9Q96B70 501 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 MVB12AQ96EY5 273 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 AIFM3Q96NN9 605 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 REXO4Q9GZR2 422 aaKnown RBP6.73□□□□□ -1.33
CALD1-219ENST00000480638 FZD1Q9UP38 647 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 POLHQ9Y253 713 aa6.73□□□□□ -1.33
CALD1-219ENST00000480638 MARCH11A6NNE9 402 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 OFD1O75665 1012 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 CYP2C19P33261 490 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 NOGQ13253 232 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 NFE2Q16621 373 aaPredicted RBP6.72□□□□□ -1.33
CALD1-219ENST00000480638 IFIT1BQ5T764 474 aaKnown RBP6.72□□□□□ -1.33
CALD1-219ENST00000480638 THEMIS2Q5TEJ8 643 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 TSHZ3Q63HK5 1081 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 TPH2Q8IWU9 490 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 SYNE4Q8N205 404 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 IL17RDQ8NFM7 739 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 HAS1Q92839 578 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 ZSWIM1Q9BR11 485 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 PACSIN1Q9BY11 444 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 MAN1C1Q9NR34 630 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 EID1Q9Y6B2 187 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 FPGT-TNNI3KV9GXZ4 949 aa6.72□□□□□ -1.33
CALD1-219ENST00000480638 NT5C1B-RDH14C9J2C7 533 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 PPM1GO15355 546 aaPredicted RBP6.71□□□□□ -1.34
CALD1-219ENST00000480638 PPFIA4O75335 1185 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 SCGB1D2O95969 90 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 CKBP12277 381 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 LAG3P18627 525 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 MAKP20794 623 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 MCM7P33993 719 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 MAP2K6P52564 334 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 NOMO3P69849 1222 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 OCA2Q04671 838 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 SLFN5Q08AF3 891 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 ABHD18Q0P651 414 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 ZNF267Q14586 743 aaPredicted RBP6.71□□□□□ -1.34
CALD1-219ENST00000480638 PPP2R5AQ15172 486 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 FLYWCH1Q4VC44 716 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 NOMO2Q5JPE7 1267 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 ZNF365Q70YC5 407 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 MRGPREQ86SM8 312 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 MAPKAPK5Q8IW41 473 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 TBC1D15Q8TC07 691 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 NUP133Q8WUM0 1156 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 CLIP3Q96DZ5 547 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 MYEOVQ96EZ4 313 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 MAP3K14Q99558 947 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 RNPEPQ9H4A4 650 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 NMRK2Q9NPI5 230 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 JKAMPQ9P055 326 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 G3BP2Q9UN86 482 aaKnown RBP6.71□□□□□ -1.34
CALD1-219ENST00000480638 HS3ST3A1Q9Y663 406 aa6.71□□□□□ -1.34
CALD1-219ENST00000480638 A0A1B0GTW7 788 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 CCDC78A2IDD5 438 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 F2RL2O00254 374 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 SLC43A1O75387 559 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 ARIH2O95376 493 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 CFIP05156 583 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 ELANEP08246 267 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 ACVRL1P37023 503 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 HK3P52790 923 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 LRRC41Q15345 812 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 TIGD2Q4W5G0 525 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 GRAMD1CQ8IYS0 662 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 CPEB3Q8NE35 698 aaKnown RBP6.7□□□□□ -1.34
CALD1-219ENST00000480638 DIS3LQ8TF46 1054 aaKnown RBP6.7□□□□□ -1.34
CALD1-219ENST00000480638 SCAND2PQ9GZW5 306 aaPredicted RBP6.7□□□□□ -1.34
CALD1-219ENST00000480638 KMT5AQ9NQR1 393 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 DKK2Q9UBU2 259 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 MAP3K2Q9Y2U5 619 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 PCDHA3Q9Y5H8 950 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 HS3ST4Q9Y661 456 aa6.7□□□□□ -1.34
CALD1-219ENST00000480638 AATKQ6ZMQ8 1374 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 TMEM200CA6NKL6 621 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 AP1G1O43747 822 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 LPXNO60711 386 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 NDUFA10O95299 355 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 ABHD16AO95870 558 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 ADH4P08319 380 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 FCER1AP12319 257 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 HSPA6P17066 643 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms