RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 SMYD4Q8IYR2 804 aaPredicted RBP13.1□□□□□ -0.31
CCM2-212ENST00000480382 MRPL43Q8N983 215 aaKnown RBP13.1□□□□□ -0.31
CCM2-212ENST00000480382 HLA-CQ95604 372 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 SMARCE1Q969G3 411 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 PABPC5Q96DU9 382 aaKnown RBP13.1□□□□□ -0.31
CCM2-212ENST00000480382 DDX27Q96GQ7 796 aaKnown RBP13.1□□□□□ -0.31
CCM2-212ENST00000480382 ASB7Q9H672 318 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 MRPL17Q9NRX2 175 aaKnown RBP13.1□□□□□ -0.31
CCM2-212ENST00000480382 HOOK1Q9UJC3 728 aaKnown RBP13.1□□□□□ -0.31
CCM2-212ENST00000480382 MAPK8IP1Q9UQF2 711 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 PCDHA5Q9Y5H7 936 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 I3L4J1 428 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 TBX10O75333 385 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 SMC2O95347 1197 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 GLP2RO95838 553 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 CYP3A5P20815 502 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 LRPAP1P30533 357 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 SCN1AP35498 2009 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 SNRPFP62306 86 aaKnown RBP13.09□□□□□ -0.31
CCM2-212ENST00000480382 POU5F1Q01860 360 aaKnown RBP13.09□□□□□ -0.31
CCM2-212ENST00000480382 DSG1Q02413 1049 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 USP41Q3LFD5 358 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 RTP2Q5QGT7 225 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 SPATA1Q5VX52 437 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 LLGL2Q6P1M3 1020 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 DCLRE1AQ6PJP8 1040 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 EFHBQ8N7U6 833 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 BEST2Q8NFU1 509 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 VN1R2Q8NFZ6 395 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 FAM84AQ96KN4 292 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 GSDMAQ96QA5 445 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 CDCA3Q99618 268 aaPredicted RBP13.09□□□□□ -0.31
CCM2-212ENST00000480382 KCTD10Q9H3F6 313 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 CHST7Q9NS84 486 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 RMND1Q9NWS8 449 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 COG5Q9UP83 839 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 DERAQ9Y315 318 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 C2CD2Q9Y426 696 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 IRAK3Q9Y616 596 aa13.09□□□□□ -0.31
CCM2-212ENST00000480382 C5orf42Q9H799 3197 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 VCANP13611 3396 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 ZNF233A6NK53 670 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 H3BQ06 376 aaPredicted RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 PPEF2O14830 753 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 NCK2O43639 380 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 LILRB3O75022 631 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 CLASP2O75122 1294 aaKnown RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 KIF20AO95235 890 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 KCNA5P22460 613 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 RPL9P32969 192 aaKnown RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 MCM4P33991 863 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 LTBRP36941 435 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 NDUFV1P49821 464 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 DLX2Q07687 328 aaPredicted RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 ELAVL2Q12926 359 aaKnown RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 ADAM15Q13444 863 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 SNRNP35Q16560 246 aaKnown RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 CTC1Q2NKJ3 1217 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 FAM171A1Q5VUB5 890 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 KIAA0319Q5VV43 1072 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 KIAA1841Q6NSI8 718 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 PRSS55Q6UWB4 352 aaPredicted RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 CEP57Q86XR8 500 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 C12orf56Q8IXR9 622 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 ELOA2Q8IYF1 753 aaPredicted RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 GUF1Q8N442 669 aaKnown RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 XXYLT1Q8NBI6 393 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 RDH13Q8NBN7 331 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 SPATA20Q8TB22 786 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 GOLGA5Q8TBA6 731 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 RIN2Q8WYP3 895 aaPredicted RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 FBXL18Q96ME1 805 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 GBP4Q96PP9 640 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 TSPAN18Q96SJ8 248 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 TTPALQ9BTX7 342 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 EMILIN2Q9BXX0 1053 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 PDE11AQ9HCR9 933 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 CGNQ9P2M7 1197 aaKnown RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 BARX2Q9UMQ3 279 aaPredicted RBP13.08□□□□□ -0.32
CCM2-212ENST00000480382 NUB1Q9Y5A7 615 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 PTPRJQ12913 1337 aa13.08□□□□□ -0.32
CCM2-212ENST00000480382 FSD2A1L4K1 749 aa13.07□□□□□ -0.32
CCM2-212ENST00000480382 PDXKO00764 312 aa13.07□□□□□ -0.32
CCM2-212ENST00000480382 EXOC3O60645 756 aa13.07□□□□□ -0.32
CCM2-212ENST00000480382 RPL17P18621 184 aaKnown RBP13.07□□□□□ -0.32
CCM2-212ENST00000480382 TKTP29401 623 aaKnown RBP13.07□□□□□ -0.32
CCM2-212ENST00000480382 TFAMQ00059 246 aaKnown RBP13.07□□□□□ -0.32
CCM2-212ENST00000480382 CLUL1Q15846 466 aa13.07□□□□□ -0.32
CCM2-212ENST00000480382 ZNF658Q5TYW1 1059 aaPredicted RBP13.07□□□□□ -0.32
CCM2-212ENST00000480382 LMBRD2Q68DH5 695 aaPredicted RBP13.07□□□□□ -0.32
CCM2-212ENST00000480382 ISM2Q6H9L7 571 aa13.07□□□□□ -0.32
CCM2-212ENST00000480382 GLYCTKQ8IVS8 523 aa13.07□□□□□ -0.32
CCM2-212ENST00000480382 KLHL5Q96PQ7 755 aa13.07□□□□□ -0.32
CCM2-212ENST00000480382 KIAA1586Q9HCI6 787 aa13.07□□□□□ -0.32
CCM2-212ENST00000480382 DPP3Q9NY33 737 aa13.07□□□□□ -0.32
CCM2-212ENST00000480382 MAN1B1Q9UKM7 699 aa13.07□□□□□ -0.32
CCM2-212ENST00000480382 SSX2IPQ9Y2D8 614 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms