RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 TDGF1P13385 188 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 CYP11B2P19099 503 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 IGFBP6P24592 240 aaPredicted RBP7.77□□□□□ -1.17
COL17A1-205ENST00000480127 ARPP19P56211 112 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 PEX3P56589 373 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 ADCY1Q08828 1119 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 RAD51AP2Q09MP3 1159 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 MTAPQ13126 283 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 PTGDRQ13258 359 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 RAB33AQ14088 237 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 DHX8Q14562 1220 aaKnown RBP7.77□□□□□ -1.17
COL17A1-205ENST00000480127 NBR1Q14596 966 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 NAB2Q15742 525 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 PSMD5Q16401 504 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 ST3GAL2Q16842 350 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 AXDND1Q5T1B0 1012 aaPredicted RBP7.77□□□□□ -1.17
COL17A1-205ENST00000480127 ZNF687Q8N1G0 1237 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 SLC7A14Q8TBB6 771 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 MTMR9Q96QG7 549 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 KIFC3Q9BVG8 833 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 MRPL4Q9BYD3 311 aaKnown RBP7.77□□□□□ -1.17
COL17A1-205ENST00000480127 NFKBIZQ9BYH8 718 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 CXCL16Q9H2A7 254 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 ZHX3Q9H4I2 956 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 PDZD7Q9H5P4 517 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 POLD4Q9HCU8 107 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 HEBP1Q9NRV9 189 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 KCNH3Q9ULD8 1083 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 DOCK6Q96HP0 2047 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 TDRD15B5MCY1 1934 aaKnown RBP7.77□□□□□ -1.17
COL17A1-205ENST00000480127 PHLPP2Q6ZVD8 1323 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 ACACBO00763 2458 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 VWA3AA6NCI4 1184 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 LAD1O00515 517 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 ACKR2O00590 384 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 PRRG1O14668 218 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 NCAM2O15394 837 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 ECI2O75521 394 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 SEC24BO95487 1268 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 SPATA31C1P0DKV0 1188 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 MARCKSP29966 332 aaPredicted RBP7.76□□□□□ -1.17
COL17A1-205ENST00000480127 OR1D2P34982 312 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 SPEM2Q0P670 501 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 SLC5A9Q2M3M2 681 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 UVSSAQ2YD98 709 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 PABPC1LQ4VXU2 614 aaKnown RBP7.76□□□□□ -1.17
COL17A1-205ENST00000480127 GLRA4Q5JXX5 417 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 TANGO2Q6ICL3 276 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 ZNF852Q6ZMS4 543 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 MAMSTRQ6ZN01 415 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 ELMOD1Q8N336 334 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 ING5Q8WYH8 240 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 MCRS1Q96EZ8 462 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 CALML4Q96GE6 196 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 PLIN2Q99541 437 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 FAM126AQ9BYI3 521 aaPredicted RBP7.76□□□□□ -1.17
COL17A1-205ENST00000480127 SLC38A7Q9NVC3 462 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 KCNG1Q9UIX4 513 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 GMEB2Q9UKD1 530 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 USP20Q9Y2K6 914 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.76□□□□□ -1.17
COL17A1-205ENST00000480127 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.76□□□□□ -1.17
COL17A1-205ENST00000480127 TPRP12270 2363 aaKnown RBP7.76□□□□□ -1.17
COL17A1-205ENST00000480127 NOTCH4Q99466 2003 aa7.76□□□□□ -1.17
COL17A1-205ENST00000480127 VPS37CA5D8V6 355 aaPredicted RBP7.75□□□□□ -1.17
COL17A1-205ENST00000480127 TTLL13PA6NNM8 815 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 H0YCG3 227 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 WNT7AO00755 349 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 NRG2O14511 850 aaPredicted RBP7.75□□□□□ -1.17
COL17A1-205ENST00000480127 SLC30A4O14863 429 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 SLC16A4O15374 487 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 HIP1RO75146 1068 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 TBCAO75347 108 aaKnown RBP7.75□□□□□ -1.17
COL17A1-205ENST00000480127 LRG1P02750 347 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 RHOP08100 348 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 MUTP22033 750 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 FGFR3P22607 806 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 FCARP24071 287 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 UBA7P41226 1012 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 MCM2P49736 904 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 FXR2P51116 673 aaKnown RBP eCLIP7.75□□□□□ -1.17
COL17A1-205ENST00000480127 PDIA5Q14554 519 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 LPAL2Q16609 132 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 RILPL1Q5EBL4 403 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 PPM1JQ5JR12 505 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 CDCA2Q69YH5 1023 aaPredicted RBP7.75□□□□□ -1.17
COL17A1-205ENST00000480127 LAIR1Q6GTX8 287 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 CD300LGQ6UXG3 332 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.75□□□□□ -1.17
COL17A1-205ENST00000480127 PPP4R3CPQ6ZMV5 832 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 RTL10Q7L3V2 364 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 DNASE1L2Q92874 299 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 ELSPBP1Q96BH3 223 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 FAM212AQ96EL1 285 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 UROC1Q96N76 676 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 ACAP3Q96P50 834 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 CHRDQ9H2X0 955 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 AVENQ9NQS1 362 aaPredicted RBP7.75□□□□□ -1.17
COL17A1-205ENST00000480127 GDE1Q9NZC3 331 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 MTRRQ9UBK8 725 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms