RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 GIT1Q9Y2X7 761 aa13.28□□□□□ -0.28
USP11-208ENST00000480104 THADAQ6YHU6 1953 aa13.28□□□□□ -0.28
USP11-208ENST00000480104 SALL3Q9BXA9 1300 aa13.28□□□□□ -0.28
USP11-208ENST00000480104 ZMYM2Q9UBW7 1377 aa13.28□□□□□ -0.28
USP11-208ENST00000480104 TDRD15B5MCY1 1934 aaKnown RBP13.27□□□□□ -0.28
USP11-208ENST00000480104 WDR64B1ANS9 1081 aa13.27□□□□□ -0.29
USP11-208ENST00000480104 SH3BP5O60239 455 aa13.27□□□□□ -0.29
USP11-208ENST00000480104 WISP1O95388 367 aa13.27□□□□□ -0.29
USP11-208ENST00000480104 CFIP05156 583 aa13.27□□□□□ -0.29
USP11-208ENST00000480104 MYL4P12829 197 aa13.27□□□□□ -0.29
USP11-208ENST00000480104 AKAP5P24588 427 aa13.27□□□□□ -0.29
USP11-208ENST00000480104 MAPK6Q16659 721 aa13.27□□□□□ -0.29
USP11-208ENST00000480104 USP39Q53GS9 565 aaKnown RBP13.27□□□□□ -0.29
USP11-208ENST00000480104 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.27□□□□□ -0.29
USP11-208ENST00000480104 ARMCX6Q7L4S7 300 aa13.27□□□□□ -0.29
USP11-208ENST00000480104 HEATR3Q7Z4Q2 680 aa13.27□□□□□ -0.29
USP11-208ENST00000480104 SRBD1Q8N5C6 995 aaKnown RBP13.27□□□□□ -0.29
USP11-208ENST00000480104 OR2I1PQ8NGU4 316 aa13.27□□□□□ -0.29
USP11-208ENST00000480104 FCRL3Q96P31 734 aaPredicted RBP13.27□□□□□ -0.29
USP11-208ENST00000480104 ATXN2Q99700 1313 aaKnown RBP13.27□□□□□ -0.29
USP11-208ENST00000480104 TRABD2BA6NFA1 517 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 KRT38O76015 456 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 EGFP01133 1207 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 PI4KAP42356 2102 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 ELAVL2Q12926 359 aaKnown RBP13.26□□□□□ -0.29
USP11-208ENST00000480104 DMC1Q14565 340 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 ARHGAP29Q52LW3 1261 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 SLC23A3Q6PIS1 610 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 TOGARAM2Q6ZUX3 1019 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 SYT13Q7L8C5 426 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 HAUS6Q7Z4H7 955 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 SYT12Q8IV01 421 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 MINDY1Q8N5J2 469 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 DAGLBQ8NCG7 672 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 CTCFLQ8NI51 663 aaPredicted RBP13.26□□□□□ -0.29
USP11-208ENST00000480104 SHKBP1Q8TBC3 707 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 CREBBPQ92793 2442 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 CHMP4BQ9H444 224 aaKnown RBP13.26□□□□□ -0.29
USP11-208ENST00000480104 POLMQ9NP87 494 aaPredicted RBP13.26□□□□□ -0.29
USP11-208ENST00000480104 DISC1Q9NRI5 854 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 KLK14Q9P0G3 267 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 APOBEC2Q9Y235 224 aaKnown RBP13.26□□□□□ -0.29
USP11-208ENST00000480104 COL4A3BPQ9Y5P4 624 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 INSL5Q9Y5Q6 135 aa13.26□□□□□ -0.29
USP11-208ENST00000480104 ERICH2A1L162 156 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 FOSP01100 380 aaPredicted RBP13.25□□□□□ -0.29
USP11-208ENST00000480104 FGFR3P22607 806 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 SMARCA1P28370 1054 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 ELF1P32519 619 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 PTGER3P43115 390 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 ROR1Q01973 937 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 TUSC3Q13454 348 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 ITPRIPL2Q3MIP1 535 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 SRGAP1Q7Z6B7 1085 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 SLCO6A1Q86UG4 719 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 RPLP0P6Q8NHW5 317 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 CPB2Q96IY4 423 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 PCDHB9Q9Y5E1 797 aa13.25□□□□□ -0.29
USP11-208ENST00000480104 TNFRSF10BO14763 440 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 MAFO75444 373 aaPredicted RBP13.24□□□□□ -0.29
USP11-208ENST00000480104 SEC24AO95486 1093 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 PRKCBP05771 671 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 SRGAP2CP0DJJ0 459 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 EPHA5P54756 1037 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
USP11-208ENST00000480104 STXBP5Q5T5C0 1151 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 IQCEQ6IPM2 695 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 TYW1BQ6NUM6 668 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 NOTUMQ6P988 496 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 TMPRSS7Q7RTY8 843 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 ARID3BQ8IVW6 561 aaPredicted RBP13.24□□□□□ -0.29
USP11-208ENST00000480104 TSTD1Q8NFU3 115 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 CHFRQ96EP1 664 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 CCDC51Q96ER9 411 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 LZTS2Q9BRK4 669 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 NIFKQ9BYG3 293 aaKnown RBP13.24□□□□□ -0.29
USP11-208ENST00000480104 CYP4F11Q9HBI6 524 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 RIC8AQ9NPQ8 531 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 ASAH2Q9NR71 780 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 CEP72Q9P209 647 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 BACE2Q9Y5Z0 518 aa13.24□□□□□ -0.29
USP11-208ENST00000480104 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 TRDMT1O14717 391 aaKnown RBP13.23□□□□□ -0.29
USP11-208ENST00000480104 TSPAN1O60635 241 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 ERLIN2O94905 339 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 TKTP29401 623 aaKnown RBP13.23□□□□□ -0.29
USP11-208ENST00000480104 SETQ01105 290 aaPredicted RBP13.23□□□□□ -0.29
USP11-208ENST00000480104 GFPT1Q06210 699 aaPredicted RBP13.23□□□□□ -0.29
USP11-208ENST00000480104 LPCAT2Q7L5N7 544 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 TICAM2Q86XR7 235 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 TCEAL8Q8IYN2 117 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 HACE1Q8IYU2 909 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 ELMOD1Q8N336 334 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 ZNF461Q8TAF7 563 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 DDX27Q96GQ7 796 aaKnown RBP13.23□□□□□ -0.29
USP11-208ENST00000480104 MAP3K14Q99558 947 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 TRIM6Q9C030 488 aaPredicted RBP13.23□□□□□ -0.29
USP11-208ENST00000480104 GPR88Q9GZN0 384 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 CSRNP2Q9H175 543 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 FBRSL1Q9HCM7 1045 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms