RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 DMRT3Q9NQL9 472 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 POGKQ9P215 609 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 SCOCQ9UIL1 159 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 PIEZO1Q92508 2521 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 MUC3AQ02505 3323 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 NUP155O75694 1391 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 ACEP12821 1306 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 A0A0A6YYK5 440 aaPredicted RBP6.6□□□□□ -1.35
UPF3A-205ENST00000479712 ITGB5P18084 799 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 EDNRBP24530 442 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 IGFBP6P24592 240 aaPredicted RBP6.6□□□□□ -1.35
UPF3A-205ENST00000479712 WASP42768 502 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 EPHB3P54753 998 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 ANTXR2P58335 489 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 FOXO4P98177 505 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 OS9Q13438 667 aaPredicted RBP6.6□□□□□ -1.35
UPF3A-205ENST00000479712 PRR23BQ6ZRT6 265 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 MIGA2Q7L4E1 593 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 IGDCC3Q8IVU1 814 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 TTLL6Q8N841 843 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 KYQ8NBH2 561 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 SVIPQ8NHG7 77 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 FMNL2Q96PY5 1086 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 MPHOSPH6Q99547 160 aaKnown RBP6.6□□□□□ -1.35
UPF3A-205ENST00000479712 SOX7Q9BT81 388 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 FAM204AQ9H8W3 233 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 SAE1Q9UBE0 346 aaPredicted RBP6.6□□□□□ -1.35
UPF3A-205ENST00000479712 USP25Q9UHP3 1055 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 DNAI1Q9UI46 699 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 FBXO10Q9UK96 956 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 INTUQ9ULD6 942 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 FAM50BQ9Y247 325 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 RIPOR2Q9Y4F9 1068 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 IPPQ9Y573 584 aa6.6□□□□□ -1.35
UPF3A-205ENST00000479712 RPTORQ8N122 1335 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 A0A0G2JNJ9 132 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 A6NNZ2 444 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 H0Y858 1186 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 N4BP3O15049 544 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 PAX4O43316 350 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 CYP7B1O75881 506 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 CHGBP05060 677 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 GSPT1P15170 499 aaKnown RBP6.59□□□□□ -1.35
UPF3A-205ENST00000479712 JUNBP17275 347 aaPredicted RBP6.59□□□□□ -1.35
UPF3A-205ENST00000479712 TXKP42681 527 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 USP14P54578 494 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 SAFBQ15424 915 aaKnown RBP eCLIP6.59□□□□□ -1.35
UPF3A-205ENST00000479712 C3orf36Q3SXR2 165 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 TMEM200BQ69YZ2 307 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 CHST15Q7LFX5 561 aaPredicted RBP6.59□□□□□ -1.35
UPF3A-205ENST00000479712 OVCH2Q7RTZ1 564 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 SRGAP1Q7Z6B7 1085 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 DENND1CQ8IV53 801 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 SAMD3Q8N6K7 520 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 PPP1R35Q8TAP8 253 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 MORC4Q8TE76 937 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 DPF2Q92785 391 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 HDAC10Q969S8 669 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 ZBTB8AQ96BR9 441 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 NOX5Q96PH1 765 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 Q9UFV3 132 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 PTPN22Q9Y2R2 807 aa6.59□□□□□ -1.35
UPF3A-205ENST00000479712 BAHCC1Q9P281 2608 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 H3BML4 177 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 TPP1O14773 563 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 SEMA7AO75326 666 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 KNG1P01042 644 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 GYS1P13807 737 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 PHKG2P15735 406 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 LIMS1P48059 325 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 PPP3CAQ08209 521 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 MGAT2Q10469 447 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 SMAD4Q13485 552 aaKnown RBP6.58□□□□□ -1.36
UPF3A-205ENST00000479712 PICALMQ13492 652 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 MAN2A1Q16706 1144 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 IL31Q6EBC2 164 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 FAM180AQ6UWF9 173 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 LINC00482Q8N8I6 264 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 PPP1R14CQ8TAE6 165 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 RIN2Q8WYP3 895 aaPredicted RBP6.58□□□□□ -1.36
UPF3A-205ENST00000479712 SLC39A13Q96H72 371 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 WDR92Q96MX6 357 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 SGPP1Q9BX95 441 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 KCNK12Q9HB15 430 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 RBM12Q9NTZ6 932 aaKnown RBP6.58□□□□□ -1.36
UPF3A-205ENST00000479712 FAM53CQ9NYF3 392 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 COMMD10Q9Y6G5 202 aa6.58□□□□□ -1.36
UPF3A-205ENST00000479712 EIF3AQ14152 1382 aaKnown RBP6.57□□□□□ -1.36
UPF3A-205ENST00000479712 ANO9A1A5B4 782 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 FAM171A2A8MVW0 826 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 FAM227AF5H4B4 570 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 APAF1O14727 1248 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 TMEM127O75204 238 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 TUSC2O75896 110 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 FSBPO95073 299 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 ZBED1O96006 694 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 IFIT2P09913 472 aaKnown RBP6.57□□□□□ -1.36
UPF3A-205ENST00000479712 RHCEP18577 417 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 MRE11P49959 708 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 NEK3P51956 506 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms