RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 NRLP54845 237 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 ANAPC15P60006 121 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 LMNB2Q03252 620 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 ORC2Q13416 577 aaPredicted RBP10.61□□□□□ -0.71
CCM2-210ENST00000478169 ME3Q16798 604 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 XKR4Q5GH76 650 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 GLRA4Q5JXX5 417 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 NT5DC1Q5TFE4 455 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 TANGO2Q6ICL3 276 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 ALKAL1Q6UXT8 129 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 TCEAL8Q8IYN2 117 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 KIFAP3Q92845 792 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 ZFP14Q9HCL3 533 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 HEBP1Q9NRV9 189 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 TOPORSQ9NS56 1045 aaPredicted RBP10.61□□□□□ -0.71
CCM2-210ENST00000478169 SLC38A7Q9NVC3 462 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 SMG5Q9UPR3 1016 aaKnown RBP10.61□□□□□ -0.71
CCM2-210ENST00000478169 TNFSF13BQ9Y275 285 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 USP20Q9Y2K6 914 aa10.61□□□□□ -0.71
CCM2-210ENST00000478169 SHISA7A6NL88 538 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 H7C4K7 107 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 K7ERI5 159 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 PRRG1O14668 218 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 SYN3O14994 580 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 CEBPBP17676 345 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 IGFBP6P24592 240 aaPredicted RBP10.6□□□□□ -0.71
CCM2-210ENST00000478169 GRM5P41594 1212 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 BRCC3P46736 316 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 ATXN1P54253 815 aaKnown RBP10.6□□□□□ -0.71
CCM2-210ENST00000478169 YARSP54577 528 aaKnown RBP10.6□□□□□ -0.71
CCM2-210ENST00000478169 ROR1Q01973 937 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 MTAPQ13126 283 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 PPP2R5DQ14738 602 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 PRSS36Q5K4E3 855 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 TPGS2Q68CL5 300 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 HAUS3Q68CZ6 603 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 NECAB1Q8N987 351 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 C3orf58Q8NDZ4 430 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 NSUN7Q8NE18 718 aaKnown RBP10.6□□□□□ -0.71
CCM2-210ENST00000478169 IRF7Q92985 503 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 TRMT61BQ9BVS5 477 aaKnown RBP10.6□□□□□ -0.71
CCM2-210ENST00000478169 CCDC94Q9BW85 323 aaPredicted RBP10.6□□□□□ -0.71
CCM2-210ENST00000478169 BRD9Q9H8M2 597 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 TRPV5Q9NQA5 729 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 GMEB2Q9UKD1 530 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 MAFFQ9ULX9 164 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 COL4A2P08572 1712 aa10.6□□□□□ -0.71
CCM2-210ENST00000478169 WDR27A2RRH5 827 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 I3L4J1 428 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 PODXLO00592 558 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 OR52Z1P0C646 297 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 TDGF1P13385 188 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 PSMC3P17980 439 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 TGM1P22735 817 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 FCARP24071 287 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 RPL9P32969 192 aaKnown RBP10.59□□□□□ -0.71
CCM2-210ENST00000478169 SOX4Q06945 474 aaPredicted RBP10.59□□□□□ -0.71
CCM2-210ENST00000478169 MRPL58Q14197 206 aaKnown RBP10.59□□□□□ -0.71
CCM2-210ENST00000478169 SAFBQ15424 915 aaKnown RBP eCLIP10.59□□□□□ -0.71
CCM2-210ENST00000478169 FAM78AQ5JUQ0 283 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 CYP4A22Q5TCH4 519 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 IQCEQ6IPM2 695 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 TSSK4Q6SA08 328 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 PDZD4Q76G19 769 aaPredicted RBP10.59□□□□□ -0.71
CCM2-210ENST00000478169 CORO1BQ9BR76 489 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 RTKNQ9BST9 563 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 KIFC3Q9BVG8 833 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 CHRDQ9H2X0 955 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 CYP4F11Q9HBI6 524 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 GOLGA2P5Q9HBQ8 144 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 PTPRHQ9HD43 1115 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 CDV3Q9UKY7 258 aaKnown RBP10.59□□□□□ -0.71
CCM2-210ENST00000478169 SPAG17Q6Q759 2223 aa10.59□□□□□ -0.71
CCM2-210ENST00000478169 PHLPP2Q6ZVD8 1323 aa10.58□□□□□ -0.71
CCM2-210ENST00000478169 LARGE1O95461 756 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 SEC24AO95486 1093 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 KCNE1P15382 129 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 MLLT6P55198 1093 aaPredicted RBP10.58□□□□□ -0.72
CCM2-210ENST00000478169 MAP4K3Q8IVH8 894 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 ELMOD1Q8N336 334 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 CELF5Q8N6W0 485 aaKnown RBP10.58□□□□□ -0.72
CCM2-210ENST00000478169 LEMD2Q8NC56 503 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 DEPDC1BQ8WUY9 529 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 FAM3CQ92520 227 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 SMARCD2Q92925 531 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 TCEAL4Q96EI5 215 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 ZNF512Q96ME7 567 aaPredicted RBP10.58□□□□□ -0.72
CCM2-210ENST00000478169 ASB16Q96NS5 453 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 ACO2Q99798 780 aaKnown RBP10.58□□□□□ -0.72
CCM2-210ENST00000478169 GPR88Q9GZN0 384 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 BHMT2Q9H2M3 363 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 TMEM134Q9H6X4 195 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 TRPV4Q9HBA0 871 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 ZNF334Q9HCZ1 680 aaPredicted RBP10.58□□□□□ -0.72
CCM2-210ENST00000478169 FBXL5Q9UKA1 691 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 RAB23Q9ULC3 237 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 USP18Q9UMW8 372 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 NDRG2Q9UN36 371 aaKnown RBP10.58□□□□□ -0.72
CCM2-210ENST00000478169 NUB1Q9Y5A7 615 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms