RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ZNF512Q96ME7 567 aaPredicted RBP6.15□□□□□ -1.42
VPS50-214ENST00000477935 ENKD1Q9H0I2 346 aa6.15□□□□□ -1.42
VPS50-214ENST00000477935 CCM2LQ9NUG4 571 aaPredicted RBP6.15□□□□□ -1.42
VPS50-214ENST00000477935 CRYBG1Q9Y4K1 1723 aa6.15□□□□□ -1.42
VPS50-214ENST00000477935 ACEP12821 1306 aa6.15□□□□□ -1.43
VPS50-214ENST00000477935 WASHC2AQ641Q2 1341 aa6.15□□□□□ -1.43
VPS50-214ENST00000477935 POLR3AO14802 1390 aaPredicted RBP6.15□□□□□ -1.43
VPS50-214ENST00000477935 LMO7Q8WWI1 1683 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 IFT172Q9UG01 1749 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 MTHFD2P13995 350 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 CTSSP25774 331 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 CDKN1CP49918 316 aaPredicted RBP6.14□□□□□ -1.43
VPS50-214ENST00000477935 TGFB2P61812 414 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 CCT2P78371 535 aaKnown RBP6.14□□□□□ -1.43
VPS50-214ENST00000477935 SRSF2Q01130 221 aaKnown RBP6.14□□□□□ -1.43
VPS50-214ENST00000477935 DUSP2Q05923 314 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 MUM1Q2TAK8 710 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 USP39Q53GS9 565 aaKnown RBP6.14□□□□□ -1.43
VPS50-214ENST00000477935 TOR2AQ5JU69 321 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 MFSD5Q6N075 450 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 GLB1L3Q8NCI6 653 aaPredicted RBP6.14□□□□□ -1.43
VPS50-214ENST00000477935 OR5M3Q8NGP4 307 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 SNX33Q8WV41 574 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 TRIM8Q9BZR9 551 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 PUS7LQ9H0K6 701 aaKnown RBP6.14□□□□□ -1.43
VPS50-214ENST00000477935 IFT122Q9HBG6 1241 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 HECAQ9UBI9 543 aaPredicted RBP6.14□□□□□ -1.43
VPS50-214ENST00000477935 LRRC37A3O60309 1634 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 TOPAZ1Q8N9V7 1692 aa6.14□□□□□ -1.43
VPS50-214ENST00000477935 MATN3O15232 486 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 FOXN1O15353 648 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 CYP27B1O15528 508 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 CFBP00751 764 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 VEGFAP15692 232 aaPredicted RBP6.13□□□□□ -1.43
VPS50-214ENST00000477935 TNFRSF1AP19438 455 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 CDK11BP21127 795 aaKnown RBP6.13□□□□□ -1.43
VPS50-214ENST00000477935 ACRV1P26436 265 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 C19orf54Q5BKX5 351 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 ELOA2Q8IYF1 753 aaPredicted RBP6.13□□□□□ -1.43
VPS50-214ENST00000477935 KCNH5Q8NCM2 988 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 EXTL1Q92935 676 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 PAWRQ96IZ0 340 aaKnown RBP6.13□□□□□ -1.43
VPS50-214ENST00000477935 MENTQ9BUN1 341 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 DNAJC28Q9NX36 388 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 CCNL1Q9UK58 526 aaPredicted RBP6.13□□□□□ -1.43
VPS50-214ENST00000477935 GIT1Q9Y2X7 761 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 PPLO60437 1756 aa6.13□□□□□ -1.43
VPS50-214ENST00000477935 HOXA3O43365 443 aaPredicted RBP6.12□□□□□ -1.43
VPS50-214ENST00000477935 MFAP3LO75121 409 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 IL2RBP14784 551 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 GYPEP15421 78 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 KLF1Q13351 362 aaPredicted RBP6.12□□□□□ -1.43
VPS50-214ENST00000477935 ANO4Q32M45 955 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 BTNL9Q6UXG8 535 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 RNF207Q6ZRF8 634 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 Q6ZRM9 215 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 ARHGEF25Q86VW2 580 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 RPTORQ8N122 1335 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 LILRA3Q8N6C8 439 aaPredicted RBP6.12□□□□□ -1.43
VPS50-214ENST00000477935 FATE1Q969F0 183 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 IL17RAQ96F46 866 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 SCOCQ9UIL1 159 aa6.12□□□□□ -1.43
VPS50-214ENST00000477935 QSER1Q2KHR3 1735 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 PXDNLA1KZ92 1463 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 SPATA31E1Q6ZUB1 1445 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 ITGA10O75578 1167 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 IPO13O94829 963 aaKnown RBP6.11□□□□□ -1.43
VPS50-214ENST00000477935 OSMP13725 252 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 CANXP27824 592 aaKnown RBP6.11□□□□□ -1.43
VPS50-214ENST00000477935 MTNR1BP49286 362 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 GZMKP49863 264 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 GUCY2FP51841 1108 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 CRHR2Q13324 411 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 MTMR1Q13613 665 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 RRP1BQ14684 758 aaKnown RBP6.11□□□□□ -1.43
VPS50-214ENST00000477935 ADRM1Q16186 407 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 FAM214AQ32MH5 1076 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 NRN1LQ496H8 165 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 APBB1IPQ7Z5R6 666 aaPredicted RBP6.11□□□□□ -1.43
VPS50-214ENST00000477935 C1orf210Q8IVY1 113 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 GSPT2Q8IYD1 628 aaKnown RBP6.11□□□□□ -1.43
VPS50-214ENST00000477935 PRPF38AQ8NAV1 312 aaKnown RBP6.11□□□□□ -1.43
VPS50-214ENST00000477935 IL17DQ8TAD2 202 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 RIN2Q8WYP3 895 aaPredicted RBP6.11□□□□□ -1.43
VPS50-214ENST00000477935 CDK19Q9BWU1 502 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 ACE2Q9BYF1 805 aaPredicted RBP6.11□□□□□ -1.43
VPS50-214ENST00000477935 EPC1Q9H2F5 836 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 COL4A3BPQ9Y5P4 624 aa6.11□□□□□ -1.43
VPS50-214ENST00000477935 PDE4DIPQ5VU43 2346 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 PPIP5K1Q6PFW1 1433 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 PHF2O75151 1096 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 GNAT2P19087 354 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 LBX1P52954 281 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 RABGGTBP53611 331 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 SLC5A3P53794 718 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 MRPL49Q13405 166 aaKnown RBP6.1□□□□□ -1.43
VPS50-214ENST00000477935 MBNL2Q5VZF2 373 aaKnown RBP6.1□□□□□ -1.43
VPS50-214ENST00000477935 AMOTL1Q8IY63 956 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 CBARPQ8N350 705 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms