RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ISM2Q6H9L7 571 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 TMC7Q7Z402 723 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 TMEM173Q86WV6 379 aaPredicted RBP14.22□□□□□ -0.13
TOP3A-205ENST00000477508 CBWD2Q8IUF1 395 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 VPS52Q8N1B4 723 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 MLKLQ8NB16 471 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 MICAL1Q8TDZ2 1067 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 C18orf25Q96B23 403 aaPredicted RBP14.22□□□□□ -0.13
TOP3A-205ENST00000477508 MFSD14AQ96MC6 490 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 FNBP1Q96RU3 617 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 MARCH5Q9NX47 278 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 COL4A4P53420 1690 aaPredicted RBP14.22□□□□□ -0.13
TOP3A-205ENST00000477508 PRRC2BQ5JSZ5 2229 aaKnown RBP14.22□□□□□ -0.13
TOP3A-205ENST00000477508 BIN1O00499 593 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 PODXLO00592 558 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 CETN3O15182 167 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 NCK2O43639 380 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 SOD2P04179 222 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 NFICP08651 508 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 CTSAP10619 480 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 CCNE1P24864 410 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 DNAJB1P25685 340 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 AP3M2P53677 418 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 FKBP3Q00688 224 aaKnown RBP14.21□□□□□ -0.13
TOP3A-205ENST00000477508 SOX4Q06945 474 aaPredicted RBP14.21□□□□□ -0.13
TOP3A-205ENST00000477508 SPAG1Q07617 926 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 CYP24A1Q07973 514 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 ADAM9Q13443 819 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 CAMK1Q14012 370 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 SMC1AQ14683 1233 aaKnown RBP14.21□□□□□ -0.13
TOP3A-205ENST00000477508 DUOXA2Q1HG44 320 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 USP41Q3LFD5 358 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 FUT10Q6P4F1 479 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 PDXDC1Q6P996 788 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 WDR49Q8IV35 697 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 RDH13Q8NBN7 331 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 ZSWIM2Q8NEG5 633 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 SYAP1Q96A49 352 aaPredicted RBP14.21□□□□□ -0.13
TOP3A-205ENST00000477508 TCF25Q9BQ70 676 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 PAAF1Q9BRP4 392 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 MKNK1Q9BUB5 465 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 NSUN3Q9H649 340 aaKnown RBP14.21□□□□□ -0.13
TOP3A-205ENST00000477508 PDE11AQ9HCR9 933 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 ENTPD7Q9NQZ7 604 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 TUBGCP4Q9UGJ1 667 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 DACH1Q9UI36 760 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 IRAK3Q9Y616 596 aa14.21□□□□□ -0.13
TOP3A-205ENST00000477508 ANK1P16157 1881 aa14.21□□□□□ -0.14
TOP3A-205ENST00000477508 PLXNA4Q9HCM2 1894 aa14.21□□□□□ -0.14
TOP3A-205ENST00000477508 ARHGEF37A1IGU5 675 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 PPP1R3GB7ZBB8 358 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 FSCN2O14926 492 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 KIF4AO95239 1232 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 CXCL14O95715 111 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 EFEMP2O95967 443 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 URODP06132 367 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 TMEM191BP0C7N4 346 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 BMP6P22004 513 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 PSMC2P35998 433 aaKnown RBP14.2□□□□□ -0.14
TOP3A-205ENST00000477508 ERVFC1P60507 584 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 TFAMQ00059 246 aaKnown RBP14.2□□□□□ -0.14
TOP3A-205ENST00000477508 CT47A1Q5JQC4 288 aaPredicted RBP14.2□□□□□ -0.14
TOP3A-205ENST00000477508 CCDC183Q5T5S1 534 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 CEP135Q66GS9 1140 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 KIAA1841Q6NSI8 718 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 INTS8Q75QN2 995 aaKnown RBP14.2□□□□□ -0.14
TOP3A-205ENST00000477508 EFCAB13Q8IY85 973 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 RNF168Q8IYW5 571 aaPredicted RBP14.2□□□□□ -0.14
TOP3A-205ENST00000477508 MRPL43Q8N983 215 aaKnown RBP14.2□□□□□ -0.14
TOP3A-205ENST00000477508 BCL7CQ8WUZ0 217 aaPredicted RBP14.2□□□□□ -0.14
TOP3A-205ENST00000477508 ANKRD36BP1Q96IX9 119 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 HERC2P3Q9BVR0 1158 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 ZBP1Q9H171 429 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 GOLGA2P5Q9HBQ8 144 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 MRPL17Q9NRX2 175 aaKnown RBP14.2□□□□□ -0.14
TOP3A-205ENST00000477508 INTS13Q9NVM9 706 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 DPP3Q9NY33 737 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 ITGA11Q9UKX5 1188 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 R3HCC1Q9Y3T6 440 aaKnown RBP14.2□□□□□ -0.14
TOP3A-205ENST00000477508 NUB1Q9Y5A7 615 aa14.2□□□□□ -0.14
TOP3A-205ENST00000477508 MYO7AQ13402 2215 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 ANO9A1A5B4 782 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 TULP1O00294 542 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-205ENST00000477508 FGFR1OPO95684 399 aaKnown RBP14.19□□□□□ -0.14
TOP3A-205ENST00000477508 TNNC2P02585 160 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 TNNI1P19237 187 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 PNPLA4P41247 253 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 CREMQ03060 361 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 PAK1Q13153 545 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 C9orf57Q5W0N0 161 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 ANKRD40Q6AI12 368 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-205ENST00000477508 RBM43Q6ZSC3 357 aaKnown RBP14.19□□□□□ -0.14
TOP3A-205ENST00000477508 TMC2Q8TDI7 906 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 RABGGTAQ92696 567 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 CCDC127Q96BQ5 260 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 CDCA3Q99618 268 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-205ENST00000477508 CGRRF1Q99675 332 aa14.19□□□□□ -0.14
TOP3A-205ENST00000477508 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.19□□□□□ -0.14
TOP3A-205ENST00000477508 CHST7Q9NS84 486 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms