RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CMASQ8NFW8 434 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 SCFD1Q8WVM8 642 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 NECTIN4Q96NY8 510 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 KLHL5Q96PQ7 755 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 GPR62Q9BZJ7 368 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 PLEKHA4Q9H4M7 779 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 TBC1D7Q9P0N9 293 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 MAFFQ9ULX9 164 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 BACE2Q9Y5Z0 518 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 HCFC2Q9Y5Z7 792 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 LACTBL1A8MY62 500 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 PODXLO00592 558 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 RHOBTB3O94955 611 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 CNPP09543 421 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 HOXD13P35453 343 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 TNFSF9P41273 254 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 AARSP49588 968 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 SOX4Q06945 474 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 KCNA1Q09470 495 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 FAM171A1Q5VUB5 890 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 PTCRAQ6ISU1 281 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 ANKRD54Q6NXT1 300 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 CRELD2Q6UXH1 353 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 ANKS3Q6ZW76 656 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 RBM23Q86U06 439 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 SLC9A9Q8IVB4 645 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 BRSK2Q8IWQ3 736 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 ENGASEQ8NFI3 743 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 KIF12Q96FN5 646 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 SUSD3Q96L08 255 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 POP1Q99575 1024 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 PAAF1Q9BRP4 392 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 CXCL16Q9H2A7 254 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 IGFLR1Q9H665 355 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 EXOC1Q9NV70 894 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 UNC80Q8N2C7 3258 aa13.42□□□□□ -0.26
CLCNKA-205ENST00000477360 A0A0C4DFX4 3053 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 ATG2AQ2TAZ0 1938 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 GOLGA6L22H0YM25 854 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 PER2O15055 1255 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 LINC01565O15544 149 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 TGFB1I1O43294 461 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 PRPF6O94906 941 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 KLRC2P26717 231 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 GTF2F1P35269 517 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 ACOT2P49753 483 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 CLCN4P51793 760 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 UBE2HP62256 183 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 DPYDQ12882 1025 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 SNW1Q13573 536 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 TMEM132DQ14C87 1099 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 KNOP1Q1ED39 458 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 ARMCX5Q6P1M9 558 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 CD300LGQ6UXG3 332 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 C15orf39Q6ZRI6 1047 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 GPD1LQ8N335 351 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 APPL2Q8NEU8 664 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 VN1R2Q8NFZ6 395 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 LNX1Q8TBB1 728 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 CACTINQ8WUQ7 758 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 SUSD6Q92537 303 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 FGFBP2Q9BYJ0 223 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 S1PR5Q9H228 398 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 BLZF1Q9H2G9 400 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 ADAM7Q9H2U9 754 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 AGPAT3Q9NRZ7 376 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 RMND1Q9NWS8 449 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 MTRRQ9UBK8 725 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 PCDHGC5Q9Y5F6 944 aa13.41□□□□□ -0.26
CLCNKA-205ENST00000477360 CITO14578 2027 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 BDP1A6H8Y1 2624 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 ANO9A1A5B4 782 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 ZNF233A6NK53 670 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 H3BQ06 376 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 H7C4K7 107 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 M0QZQ0 153 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 PDXKO00764 312 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 TEX28O15482 410 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 MBTPS2O43462 519 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 PRPF40AO75400 957 aaKnown RBP13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 GLUD1P00367 558 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 RPN1P04843 607 aaKnown RBP13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 POU2F2P09086 479 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 PNPLA4P41247 253 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 ENPEPQ07075 957 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 DLX2Q07687 328 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 RAB33AQ14088 237 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 MRPL58Q14197 206 aaKnown RBP13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 NFIL3Q16649 462 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 KMT5BQ4FZB7 885 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 SEZ6Q53EL9 994 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 COBLL1Q53SF7 1204 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 RTP2Q5QGT7 225 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 ZBTB41Q5SVQ8 909 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 SLC8B1Q6J4K2 584 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 CES5AQ6NT32 575 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 LILRA6Q6PI73 481 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 TAS1R1Q7RTX1 841 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 SPATA20Q8TB22 786 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 ADAMTS19Q8TE59 1207 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms