RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CBWD2Q8IUF1 395 aa13.54□□□□□ -0.24
APTX-220ENST00000476858 GLYCTKQ8IVS8 523 aa13.54□□□□□ -0.24
APTX-220ENST00000476858 SYCP3Q8IZU3 236 aa13.54□□□□□ -0.24
APTX-220ENST00000476858 NOC3LQ8WTT2 800 aaKnown RBP13.54□□□□□ -0.24
APTX-220ENST00000476858 PABPC5Q96DU9 382 aaKnown RBP13.54□□□□□ -0.24
APTX-220ENST00000476858 COLEC11Q9BWP8 271 aa13.54□□□□□ -0.24
APTX-220ENST00000476858 LRRC27Q9C0I9 530 aa13.54□□□□□ -0.24
APTX-220ENST00000476858 GZF1Q9H116 711 aaPredicted RBP13.54□□□□□ -0.24
APTX-220ENST00000476858 CHST7Q9NS84 486 aa13.54□□□□□ -0.24
APTX-220ENST00000476858 PUF60Q9UHX1 559 aaKnown RBP13.54□□□□□ -0.24
APTX-220ENST00000476858 MAPK8IP1Q9UQF2 711 aa13.54□□□□□ -0.24
APTX-220ENST00000476858 PLXNA3P51805 1871 aa13.54□□□□□ -0.24
APTX-220ENST00000476858 GRXCR2A6NFK2 248 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 PODXLO00592 558 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 SPTLC1O15269 473 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 TADA2AO75478 443 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 BMP1P13497 986 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 TKTP29401 623 aaKnown RBP13.53□□□□□ -0.24
APTX-220ENST00000476858 APBB1IPQ7Z5R6 666 aaPredicted RBP13.53□□□□□ -0.24
APTX-220ENST00000476858 EFHBQ8N7U6 833 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 C12orf76Q8N812 135 aaPredicted RBP13.53□□□□□ -0.24
APTX-220ENST00000476858 TMEM87AQ8NBN3 555 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 SLC22A17Q8WUG5 538 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 RSPH1Q8WYR4 309 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 MSLNLQ96KJ4 702 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 KLHL5Q96PQ7 755 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 ASB2Q96Q27 587 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 RPF1Q9H9Y2 349 aaKnown RBP13.53□□□□□ -0.24
APTX-220ENST00000476858 AGPAT3Q9NRZ7 376 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 TOPORSQ9NS56 1045 aaPredicted RBP13.53□□□□□ -0.24
APTX-220ENST00000476858 EXOC1Q9NV70 894 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 USP25Q9UHP3 1055 aa13.53□□□□□ -0.24
APTX-220ENST00000476858 TCF20Q9UGU0 1960 aaKnown RBP13.52□□□□□ -0.24
APTX-220ENST00000476858 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
APTX-220ENST00000476858 EIF3DO15371 548 aaKnown RBP eCLIP13.52□□□□□ -0.25
APTX-220ENST00000476858 TEX28O15482 410 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 B3GAT3O94766 335 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 WEE2P0C1S8 567 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 SPATA31D3P0C874 917 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 IL9P15248 144 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 CYP2J2P51589 502 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 DSG1Q02413 1049 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 FAM160A1Q05DH4 1040 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 PPP2R3AQ06190 1150 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 POSTNQ15063 836 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 BMT2Q1RMZ1 405 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 FAM171A1Q5VUB5 890 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 ISM2Q6H9L7 571 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 ARMCX5Q6P1M9 558 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 SYCE2Q6PIF2 218 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 SPATA31D4Q6ZUB0 917 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 CEP57Q86XR8 500 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 PLEKHO2Q8TD55 490 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 RIN2Q8WYP3 895 aaPredicted RBP13.52□□□□□ -0.25
APTX-220ENST00000476858 PYM1Q9BRP8 204 aaKnown RBP13.52□□□□□ -0.25
APTX-220ENST00000476858 KCTD10Q9H3F6 313 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 PDE11AQ9HCR9 933 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 NGRNQ9NPE2 291 aaKnown RBP13.52□□□□□ -0.25
APTX-220ENST00000476858 HSPBP1Q9NZL4 362 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 HCFC2Q9Y5Z7 792 aa13.52□□□□□ -0.25
APTX-220ENST00000476858 PRPF40AO75400 957 aaKnown RBP13.51□□□□□ -0.25
APTX-220ENST00000476858 RHOBTB3O94955 611 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 GARTP22102 1010 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 SCP2P22307 547 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 GLUD2P49448 558 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 CDR1P51861 262 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 ALCAMQ13740 583 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 SPATA1Q5VX52 437 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 SLFN12LQ6IEE8 588 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 DCLRE1AQ6PJP8 1040 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 BRSK2Q8IWQ3 736 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 RDH13Q8NBN7 331 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 OR5B17Q8NGF7 314 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 CXorf38Q8TB03 319 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 LNX1Q8TBB1 728 aaPredicted RBP13.51□□□□□ -0.25
APTX-220ENST00000476858 IPO9Q96P70 1041 aaKnown RBP13.51□□□□□ -0.25
APTX-220ENST00000476858 POP1Q99575 1024 aaKnown RBP13.51□□□□□ -0.25
APTX-220ENST00000476858 PLEKHA5Q9HAU0 1116 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 EXOC7Q9UPT5 735 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 PCDHA5Q9Y5H7 936 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 TIMM13Q9Y5L4 95 aaPredicted RBP13.51□□□□□ -0.25
APTX-220ENST00000476858 IRAK3Q9Y616 596 aa13.51□□□□□ -0.25
APTX-220ENST00000476858 GOLGA6L4A6NEF3 574 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 TMEM189-UBE2V1I3L0A0 370 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 EXTL3O43909 919 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 URODP06132 367 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 FGFR3P22607 806 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 LRPAP1P30533 357 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 CASP4P49662 377 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 NDUFV1P49821 464 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 CLCN4P51793 760 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 MRPS5P82675 430 aaKnown RBP13.5□□□□□ -0.25
APTX-220ENST00000476858 TMEM132DQ14C87 1099 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 KNOP1Q1ED39 458 aaKnown RBP13.5□□□□□ -0.25
APTX-220ENST00000476858 LEXMQ3ZCV2 418 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 PDE12Q6L8Q7 609 aaKnown RBP13.5□□□□□ -0.25
APTX-220ENST00000476858 PALB2Q86YC2 1186 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 GPD1LQ8N335 351 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 ELMO3Q96BJ8 720 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms