RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	ALDH1A3	P47895	512 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PER3	P56645	1201 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	MRPS35	P82673	323 aa	Known RBP	4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	TMPRSS15	P98073	1019 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	FAM50A	Q14320	339 aa	Known RBP	4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ZNF529	Q6P280	563 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	UBE3B	Q7Z3V4	1068 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PQLC1	Q8N2U9	271 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	WDR66	Q8TBY9	1149 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ACTRT2	Q8TDY3	377 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	MARS2	Q96GW9	593 aa	Known RBP	4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	QRSL1	Q9H0R6	528 aa	Known RBP	4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	RNPEP	Q9H4A4	650 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	UNKL	Q9H9P5	680 aa	Known RBP	4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	BCO1	Q9HAY6	547 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	GALNT9	Q9HCQ5	603 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SLC23A1	Q9UHI7	598 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	DNAJC9-AS1	A6NH13	148 aa		4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ZFPL1	O95159	310 aa		4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ATP5J	P18859	108 aa		4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	GCSH	P23434	173 aa		4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ECHS1	P30084	290 aa		4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	CACNA2D1	P54289	1103 aa		4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	CYP2A13	Q16696	494 aa		4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SPATS2	Q86XZ4	545 aa	Known RBP	4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	COG1	Q8WTW3	980 aa		4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	BOD1	Q96IK1	185 aa		4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SLC29A3	Q9BZD2	475 aa		4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	REXO4	Q9GZR2	422 aa	Known RBP	4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	DDX56	Q9NY93	547 aa	Known RBP	4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	MTO1	Q9Y2Z2	717 aa	Known RBP	4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PHLDB1	Q86UU1	1377 aa		4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	COL3A1	P02461	1466 aa	Predicted RBP	4.87	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PPP3CA	Q08209	521 aa		4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	NOMO1	Q15155	1222 aa		4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ADRM1	Q16186	407 aa		4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	GEN1	Q17RS7	908 aa		4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	RNF219	Q5W0B1	726 aa	Predicted RBP	4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	NECAB2	Q7Z6G3	386 aa		4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	DRC7	Q8IY82	874 aa		4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SRRM1	Q8IYB3	904 aa	Known RBP	4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	FUBP1	Q96AE4	644 aa	Known RBP	4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PDLIM2	Q96JY6	352 aa		4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	VTA1	Q9NP79	307 aa		4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	TMEM74B	Q9NUR3	256 aa		4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	HSFX1	Q9UBD0	423 aa		4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	RUVBL1	Q9Y265	456 aa	Known RBP	4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ACTL7A	Q9Y615	435 aa		4.86	□□□□□ -1.63
TMEM50B-208	ENST00000474272	GOLGA8A	A7E2F4	631 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	KATNA1	O75449	491 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ERN1	O75460	977 aa	Known RBP	4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PCSK1	P29120	753 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	GUCY2F	P51841	1108 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SCAND1	P57086	179 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	NOMO3	P69849	1222 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	NHLH1	Q02575	133 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SP140	Q13342	867 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	BRDT	Q58F21	947 aa	Predicted RBP	4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	NOMO2	Q5JPE7	1267 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	AKNAD1	Q5T1N1	836 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	FOXR2	Q6PJQ5	311 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	FAM43A	Q8N2R8	423 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SH2D3C	Q8N5H7	860 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	RAX2	Q96IS3	184 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PAWR	Q96IZ0	340 aa	Known RBP	4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	HOMER2	Q9NSB8	354 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	TYW1	Q9NV66	732 aa	Known RBP	4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SCOC	Q9UIL1	159 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	KCNE5	Q9UJ90	142 aa		4.85	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ALG1L2	C9J202	215 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PRKD3	O94806	890 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PDGFRB	P09619	1106 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	IL2RB	P14784	551 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	GSPT1	P15170	499 aa	Known RBP	4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	GUCY1A2	P33402	732 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	VAV2	P52735	878 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SRSF4	Q08170	494 aa	Known RBP	4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	MTMR1	Q13613	665 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	MUM1	Q2TAK8	710 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PLEKHG6	Q3KR16	790 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	TOR2A	Q5JU69	321 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	BHLHA9	Q7RTU4	235 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	AUTS2	Q8WXX7	1259 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	HOXB13	Q92826	284 aa	Predicted RBP	4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ACAP3	Q96P50	834 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	GSTO2	Q9H4Y5	243 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	IFT122	Q9HBG6	1241 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	KCTD5	Q9NXV2	234 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SLC5A4	Q9NY91	659 aa		4.84	□□□□□ -1.63
TMEM50B-208	ENST00000474272	WASHC2C	Q9Y4E1	1318 aa		4.83	□□□□□ -1.64
TMEM50B-208	ENST00000474272	TCRBV7S2A1N4T	A0A589	114 aa		4.83	□□□□□ -1.64
TMEM50B-208	ENST00000474272	CGB1	A6NKQ9	187 aa		4.83	□□□□□ -1.64
TMEM50B-208	ENST00000474272	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.83	□□□□□ -1.64
TMEM50B-208	ENST00000474272	CKB	P12277	381 aa		4.83	□□□□□ -1.64
TMEM50B-208	ENST00000474272	SESN3	P58005	492 aa		4.83	□□□□□ -1.64
TMEM50B-208	ENST00000474272	PROK1	P58294	105 aa		4.83	□□□□□ -1.64

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