RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 RRN3P2A6NIE6 340 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 HAS3O00219 553 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 GPR32O75388 356 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 CYP2C9P11712 490 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 SSTR3P32745 418 aaPredicted RBP19.34■□□□□ 0.69
VARS2-206ENST00000473916 FLT3LGP49771 235 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 CPT1AP50416 773 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 CDR2Q01850 454 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 PRKCZQ05513 592 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 HSP90AA2PQ14568 343 aaPredicted RBP19.34■□□□□ 0.69
VARS2-206ENST00000473916 RPF1Q9H9Y2 349 aaKnown RBP19.34■□□□□ 0.69
VARS2-206ENST00000473916 HYOU1Q9Y4L1 999 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 LACTBL1A8MY62 500 aa19.33■□□□□ 0.68
VARS2-206ENST00000473916 ASS1P00966 412 aaKnown RBP19.33■□□□□ 0.68
VARS2-206ENST00000473916 CFHP08603 1231 aa19.33■□□□□ 0.68
VARS2-206ENST00000473916 FCGRTP55899 365 aa19.33■□□□□ 0.68
VARS2-206ENST00000473916 ADAM17P78536 824 aa19.33■□□□□ 0.68
VARS2-206ENST00000473916 DUOXA2Q1HG44 320 aa19.33■□□□□ 0.68
VARS2-206ENST00000473916 ENOSF1Q7L5Y1 443 aa19.33■□□□□ 0.68
VARS2-206ENST00000473916 DNAJB3Q8WWF6 145 aa19.33■□□□□ 0.68
VARS2-206ENST00000473916 CTNNBL1Q8WYA6 563 aaPredicted RBP19.33■□□□□ 0.68
VARS2-206ENST00000473916 MS4A14Q96JA4 679 aa19.33■□□□□ 0.68
VARS2-206ENST00000473916 ISCUQ9H1K1 167 aa19.33■□□□□ 0.68
VARS2-206ENST00000473916 CXCL16Q9H2A7 254 aa19.33■□□□□ 0.68
VARS2-206ENST00000473916 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
VARS2-206ENST00000473916 A0A0A6YYK5 440 aaPredicted RBP19.32■□□□□ 0.68
VARS2-206ENST00000473916 ERLIN2O94905 339 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 MCF2P10911 925 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 CYBAP13498 195 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 AKR1A1P14550 325 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 JADE1Q6IE81 842 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 TMEM270Q6UE05 265 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 PDCL2Q8N4E4 241 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 CAGE1Q8TC20 777 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 RFFLQ8WZ73 363 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 HHIPL1Q96JK4 782 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 ANKRD62A6NC57 917 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 B4GALT4O60513 344 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 C6orf222P0C671 652 aaPredicted RBP19.32■□□□□ 0.68
VARS2-206ENST00000473916 TMEM191BP0C7N4 346 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 PURAQ00577 322 aaKnown RBP19.32■□□□□ 0.68
VARS2-206ENST00000473916 C2orf54Q08AI8 447 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 SCARA5Q6ZMJ2 495 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 ZNF410Q86VK4 478 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 TMEM40Q8WWA1 233 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 RABGGTAQ92696 567 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 ANKZF1Q9H8Y5 726 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 SIX4Q9UIU6 781 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 PCDHB4Q9Y5E5 795 aa19.32■□□□□ 0.68
VARS2-206ENST00000473916 BUB1BO60566 1050 aaPredicted RBP19.31■□□□□ 0.68
VARS2-206ENST00000473916 PGK1P00558 417 aa19.31■□□□□ 0.68
VARS2-206ENST00000473916 RHOXF2BP0C7M4 288 aa19.31■□□□□ 0.68
VARS2-206ENST00000473916 H2AFXP16104 143 aaPredicted RBP19.31■□□□□ 0.68
VARS2-206ENST00000473916 HOXA11P31270 313 aaPredicted RBP19.31■□□□□ 0.68
VARS2-206ENST00000473916 SLC10A6Q3KNW5 377 aa19.31■□□□□ 0.68
VARS2-206ENST00000473916 RHOXF2Q9BQY4 288 aa19.31■□□□□ 0.68
VARS2-206ENST00000473916 XYLT2Q9H1B5 865 aa19.31■□□□□ 0.68
VARS2-206ENST00000473916 A0A1B0GUA9 196 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 RTN2O75298 545 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 PRLRP16471 622 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 GUCY2FP51841 1108 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 AP3M2P53677 418 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 PARD6BQ9BYG5 372 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 Q9Y3F1 56 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 SCN10AQ9Y5Y9 1956 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 SMIM35A0A1B0GVV1 85 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 TCP1P17987 556 aaKnown RBP19.3■□□□□ 0.68
VARS2-206ENST00000473916 CD58P19256 250 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 DAAM2Q86T65 1068 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 UBR7Q8N806 425 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 C1orf127Q8N9H9 656 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 RBBP8NLQ8NC74 664 aaPredicted RBP19.3■□□□□ 0.68
VARS2-206ENST00000473916 PNKPQ96T60 521 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 POLIQ9UNA4 740 aa19.3■□□□□ 0.68
VARS2-206ENST00000473916 DUSP11O75319 330 aaKnown RBP19.29■□□□□ 0.68
VARS2-206ENST00000473916 NPTXRO95502 500 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 TNNC2P02585 160 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 KRT19P08727 400 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 TRPC3Q13507 836 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 SURF1Q15526 300 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 SLFN11Q7Z7L1 901 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 ANKRD36BP1Q96IX9 119 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 EIF2AQ9BY44 585 aaKnown RBP19.29■□□□□ 0.68
VARS2-206ENST00000473916 IMPG2Q9BZV3 1241 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 CASP8AP2Q9UKL3 1982 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 IL18RAPO95256 599 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 WEE2P0C1S8 567 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 GZMAP12544 262 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 ELNP15502 786 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 TBXAS1P24557 533 aaPredicted RBP19.29■□□□□ 0.68
VARS2-206ENST00000473916 CLCN6P51797 869 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 CKAP4Q07065 602 aaKnown RBP19.29■□□□□ 0.68
VARS2-206ENST00000473916 IFI16Q16666 785 aaKnown RBP19.29■□□□□ 0.68
VARS2-206ENST00000473916 CLEC16AQ2KHT3 1053 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 ZNF699Q32M78 642 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 C2CD6Q53TS8 623 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 GNASQ5JWF2 1037 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 CXCL17Q6UXB2 119 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 CATSPER4Q7RTX7 472 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 PASD1Q8IV76 773 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms