RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 CLTAP09496 248 aa17■□□□□ 0.31
CLIC3-201ENST00000473911 SCP2P22307 547 aa17■□□□□ 0.31
CLIC3-201ENST00000473911 TKTP29401 623 aaKnown RBP17■□□□□ 0.31
CLIC3-201ENST00000473911 OR1D2P34982 312 aa17■□□□□ 0.31
CLIC3-201ENST00000473911 DDIT3P35638 169 aa17■□□□□ 0.31
CLIC3-201ENST00000473911 PTPAQ15257 358 aa17■□□□□ 0.31
CLIC3-201ENST00000473911 PPM1LQ5SGD2 360 aa17■□□□□ 0.31
CLIC3-201ENST00000473911 ANKS3Q6ZW76 656 aa17■□□□□ 0.31
CLIC3-201ENST00000473911 C3orf58Q8NDZ4 430 aa17■□□□□ 0.31
CLIC3-201ENST00000473911 C18orf25Q96B23 403 aaPredicted RBP17■□□□□ 0.31
CLIC3-201ENST00000473911 FBXO2Q9UK22 296 aaPredicted RBP17■□□□□ 0.31
CLIC3-201ENST00000473911 TBX20Q9UMR3 447 aa17■□□□□ 0.31
CLIC3-201ENST00000473911 SRPRBQ9Y5M8 271 aaKnown RBP17■□□□□ 0.31
CLIC3-201ENST00000473911 DMXL1Q9Y485 3027 aa17■□□□□ 0.31
CLIC3-201ENST00000473911 PRR23AA6NEV1 266 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 NARSO43776 548 aaKnown RBP16.99■□□□□ 0.31
CLIC3-201ENST00000473911 C8AP07357 584 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 CXCL8P10145 99 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 RPL9P32969 192 aaKnown RBP16.99■□□□□ 0.31
CLIC3-201ENST00000473911 ZNF131P52739 623 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 KYAT1Q16773 422 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 SLC10A6Q3KNW5 377 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 CD300LGQ6UXG3 332 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 USP49Q70CQ1 688 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 FRMD5Q7Z6J6 570 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 KRI1Q8N9T8 703 aaKnown RBP16.99■□□□□ 0.31
CLIC3-201ENST00000473911 FLCNQ8NFG4 579 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 CLIC6Q96NY7 704 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
CLIC3-201ENST00000473911 MTRRQ9UBK8 725 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 MTMR6Q9Y217 621 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 CDY1Q9Y6F8 540 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 GVINP1Q7Z2Y8 2422 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 DOCK6Q96HP0 2047 aa16.99■□□□□ 0.31
CLIC3-201ENST00000473911 MEFVO15553 781 aaPredicted RBP16.98■□□□□ 0.31
CLIC3-201ENST00000473911 STX6O43752 255 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 HNRNPA1P09651 372 aaKnown RBP eCLIP16.98■□□□□ 0.31
CLIC3-201ENST00000473911 ABCD1P33897 745 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 NBL1P41271 181 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 PPP2R3AQ06190 1150 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 TDGQ13569 410 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 RAB33AQ14088 237 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 RRAGBQ5VZM2 374 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 GET4Q7L5D6 327 aaPredicted RBP16.98■□□□□ 0.31
CLIC3-201ENST00000473911 SLC7A14Q8TBB6 771 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 RSAD2Q8WXG1 361 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 HAPLN2Q9GZV7 340 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 IRF2BPLQ9H1B7 796 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 PLEKHA5Q9HAU0 1116 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 KCNK12Q9HB15 430 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 STK17AQ9UEE5 414 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 POLIQ9UNA4 740 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 BACE2Q9Y5Z0 518 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 DOCK8Q8NF50 2099 aa16.98■□□□□ 0.31
CLIC3-201ENST00000473911 CCL16O15467 120 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 XYLBO75191 536 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 PAPLNO95428 1278 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 NMT1P30419 496 aaKnown RBP16.97■□□□□ 0.31
CLIC3-201ENST00000473911 MCM4P33991 863 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 NUBP1P53384 320 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 SPAG1Q07617 926 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 VARS2Q5ST30 1063 aaKnown RBP16.97■□□□□ 0.31
CLIC3-201ENST00000473911 AXDND1Q5T1B0 1012 aaPredicted RBP16.97■□□□□ 0.31
CLIC3-201ENST00000473911 DYMQ7RTS9 669 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 GRASPQ7Z6J2 395 aaPredicted RBP16.97■□□□□ 0.31
CLIC3-201ENST00000473911 ST13P5Q8NFI4 369 aaPredicted RBP16.97■□□□□ 0.31
CLIC3-201ENST00000473911 KCNN1Q92952 543 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 KIF12Q96FN5 646 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 USP28Q96RU2 1077 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 MYADMQ96S97 322 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 MSTO1Q9BUK6 570 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 MFSD1Q9H3U5 465 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 RPF1Q9H9Y2 349 aaKnown RBP16.97■□□□□ 0.31
CLIC3-201ENST00000473911 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.97■□□□□ 0.31
CLIC3-201ENST00000473911 IGSF9Q9P2J2 1179 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 TUBGCP4Q9UGJ1 667 aa16.97■□□□□ 0.31
CLIC3-201ENST00000473911 H7C4K7 107 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 SYN3O14994 580 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 OGTO15294 1046 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 PIGRP01833 764 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 FSHRP23945 695 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 HOXA9P31269 272 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 TNFSF9P41273 254 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 CLCN5P51795 746 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 ARPP19P56211 112 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 RSPO2Q6UXX9 243 aaPredicted RBP16.96■□□□□ 0.31
CLIC3-201ENST00000473911 SV2BQ7L1I2 683 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 FAM212AQ96EL1 285 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 EPS15L1Q9UBC2 864 aa16.96■□□□□ 0.31
CLIC3-201ENST00000473911 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.96■□□□□ 0.31
CLIC3-201ENST00000473911 TTC26A0AVF1 554 aa16.95■□□□□ 0.3
CLIC3-201ENST00000473911 LACTBL1A8MY62 500 aa16.95■□□□□ 0.3
CLIC3-201ENST00000473911 XPOTO43592 962 aaKnown RBP16.95■□□□□ 0.3
CLIC3-201ENST00000473911 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
CLIC3-201ENST00000473911 ELF1P32519 619 aa16.95■□□□□ 0.3
CLIC3-201ENST00000473911 GTF2BQ00403 316 aa16.95■□□□□ 0.3
CLIC3-201ENST00000473911 FOXK2Q01167 660 aa16.95■□□□□ 0.3
CLIC3-201ENST00000473911 SLC39A14Q15043 492 aa16.95■□□□□ 0.3
CLIC3-201ENST00000473911 STK38Q15208 465 aa16.95■□□□□ 0.3
CLIC3-201ENST00000473911 UVSSAQ2YD98 709 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms