RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 CHMP2AO43633 222 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 STBD1O95210 358 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 RDXP35241 583 aaKnown RBP12.38□□□□□ -0.43
MACF1-215ENST00000473843 CCR2P41597 374 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 SIM1P81133 766 aaPredicted RBP12.38□□□□□ -0.43
MACF1-215ENST00000473843 SCAPQ12770 1279 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 TUSC3Q13454 348 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 PON2Q15165 354 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 PCBP1Q15365 356 aaKnown RBP eCLIP12.38□□□□□ -0.43
MACF1-215ENST00000473843 JAKMIP3Q5VZ66 844 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 CASC1Q6TDU7 716 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.38□□□□□ -0.43
MACF1-215ENST00000473843 PDZD4Q76G19 769 aaPredicted RBP12.38□□□□□ -0.43
MACF1-215ENST00000473843 YAF2Q8IY57 180 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 TMTC2Q8N394 836 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 CAMKK1Q8N5S9 505 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 RDM1Q8NG50 284 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 E2F7Q96AV8 911 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 ZSWIM3Q96MP5 696 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 CSRNP2Q9H175 543 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 IL25Q9H293 177 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 NXF3Q9H4D5 531 aaKnown RBP12.38□□□□□ -0.43
MACF1-215ENST00000473843 CDY1Q9Y6F8 540 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 TAF6LQ9Y6J9 622 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 ARID2Q68CP9 1835 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 CFAP46Q8IYW2 2715 aa12.38□□□□□ -0.43
MACF1-215ENST00000473843 SPAARA0A1B0GVQ0 90 aa12.37□□□□□ -0.43
MACF1-215ENST00000473843 HEPACAM2A8MVW5 462 aa12.37□□□□□ -0.43
MACF1-215ENST00000473843 TSPAN1O60635 241 aa12.37□□□□□ -0.43
MACF1-215ENST00000473843 GAS7O60861 476 aa12.37□□□□□ -0.43
MACF1-215ENST00000473843 SRGAP2CP0DJJ0 459 aa12.37□□□□□ -0.43
MACF1-215ENST00000473843 PKN3Q6P5Z2 889 aa12.37□□□□□ -0.43
MACF1-215ENST00000473843 ZSCAN18Q8TBC5 510 aaPredicted RBP12.37□□□□□ -0.43
MACF1-215ENST00000473843 HNRNPLLQ8WVV9 542 aaKnown RBP12.37□□□□□ -0.43
MACF1-215ENST00000473843 PSPC1Q8WXF1 523 aaKnown RBP12.37□□□□□ -0.43
MACF1-215ENST00000473843 LENG9Q96B70 501 aa12.37□□□□□ -0.43
MACF1-215ENST00000473843 LRIG1Q96JA1 1093 aa12.37□□□□□ -0.43
MACF1-215ENST00000473843 RIT2Q99578 217 aa12.37□□□□□ -0.43
MACF1-215ENST00000473843 TRIM6Q9C030 488 aaPredicted RBP12.37□□□□□ -0.43
MACF1-215ENST00000473843 UNC45AQ9H3U1 944 aa12.37□□□□□ -0.43
MACF1-215ENST00000473843 KIAA1549LQ6ZVL6 1849 aa12.37□□□□□ -0.43
MACF1-215ENST00000473843 TNRC6BQ9UPQ9 1833 aaKnown RBP12.37□□□□□ -0.43
MACF1-215ENST00000473843 COL6A6A6NMZ7 2263 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 MYO16Q9Y6X6 1858 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 PTPRQQ9UMZ3 2332 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 C2orf72A6NCS6 295 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 CASTOR2A6NHX0 329 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 KALRNO60229 2985 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 ATG13O75143 517 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 FGFR3P22607 806 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 AKAP5P24588 427 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 CIITAP33076 1130 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 NCBP1Q09161 790 aaKnown RBP12.36□□□□□ -0.43
MACF1-215ENST00000473843 FCHO2Q0JRZ9 810 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 CYP4A22Q5TCH4 519 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 CHCHD4Q8N4Q1 142 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 FANCBQ8NB91 859 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 PRPF31Q8WWY3 499 aaKnown RBP12.36□□□□□ -0.43
MACF1-215ENST00000473843 SLC7A3Q8WY07 619 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 CPB2Q96IY4 423 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 TEKT3Q9BXF9 490 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 CCDC86Q9H6F5 360 aaKnown RBP12.36□□□□□ -0.43
MACF1-215ENST00000473843 BARHL2Q9NY43 387 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 BACE2Q9Y5Z0 518 aa12.36□□□□□ -0.43
MACF1-215ENST00000473843 USP9XQ93008 2570 aaPredicted RBP12.35□□□□□ -0.43
MACF1-215ENST00000473843 DDX11L8A8MPP1 907 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 SH2B2O14492 632 aaPredicted RBP12.35□□□□□ -0.43
MACF1-215ENST00000473843 PRRG1O14668 218 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 MSH4O15457 936 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 PRC1O43663 620 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 PLA2G2AP14555 144 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 ELF1P32519 619 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 LAMTOR4Q0VGL1 99 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 LRCH2Q5VUJ6 765 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 ANO5Q75V66 913 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 MIER3Q7Z3K6 550 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 RAB44Q7Z6P3 723 aaPredicted RBP12.35□□□□□ -0.43
MACF1-215ENST00000473843 PIP4P1Q86T03 277 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 RAB11FIP4Q86YS3 637 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 EXOC8Q8IYI6 725 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 RNF149Q8NC42 400 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 KLK14Q9P0G3 267 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 SLC12A7Q9Y666 1083 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 PTPRBP23467 1997 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 ADAMTS9Q9P2N4 1935 aa12.35□□□□□ -0.43
MACF1-215ENST00000473843 CCDC194A0A1B0GVG4 234 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 UPK3BL1B0FP48 263 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 PATE3B3GLJ2 98 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 UPK3BL2E5RIL1 263 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 DCLK1O15075 740 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 ASAP2O43150 1006 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 MOSPD3O75425 235 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 PRB1P04280 392 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 GBP1P32455 592 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 LIFRP42702 1097 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 IRX4P78413 519 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 ROR1Q01973 937 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 LMAN2Q12907 356 aa12.34□□□□□ -0.43
MACF1-215ENST00000473843 ZNF423Q2M1K9 1284 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms