RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CEP72Q9P209 647 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 SORCS3Q9UPU3 1222 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 NCANO14594 1321 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 A6NNZ2 444 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 AHRRA9YTQ3 701 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 ZNF185O15231 689 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 FAM20BO75063 409 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 HMGB1P09429 215 aaKnown RBP7.25□□□□□ -1.25
CLK1-209ENST00000472679 MGAT1P26572 445 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 NKX6-1P78426 367 aaPredicted RBP7.25□□□□□ -1.25
CLK1-209ENST00000472679 NRN1LQ496H8 165 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 FAM102AQ5T9C2 384 aaPredicted RBP7.25□□□□□ -1.25
CLK1-209ENST00000472679 SPRED1Q7Z699 444 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 ZFPM1Q8IX07 1006 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 KLHDC4Q8TBB5 520 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 C1orf43Q9BWL3 253 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 ARMT1Q9H993 441 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 MAN1C1Q9NR34 630 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 EIF2B4Q9UI10 523 aaKnown RBP7.25□□□□□ -1.25
CLK1-209ENST00000472679 SLC45A2Q9UMX9 530 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 STXBP5LQ9Y2K9 1186 aa7.25□□□□□ -1.25
CLK1-209ENST00000472679 CDHR4A6H8M9 788 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 GOLGA6CA6NDK9 693 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 GOLGA6BA6NDN3 693 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 B3GALT2O43825 422 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 SLC43A1O75387 559 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 C1SP09871 688 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 GOLGA6DP0CG33 693 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 MTHFD1P11586 935 aaKnown RBP7.24□□□□□ -1.25
CLK1-209ENST00000472679 TYRP14679 529 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 HTR1BP28222 390 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 PRDX5P30044 214 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 SLC25A3Q00325 362 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 PLS1Q14651 629 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 GRM3Q14832 879 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 ATP2B3Q16720 1220 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 GFOD2Q3B7J2 385 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 CCDC157Q569K6 752 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 RABL3Q5HYI8 236 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 RNF207Q6ZRF8 634 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 COL23A1Q86Y22 540 aaPredicted RBP7.24□□□□□ -1.25
CLK1-209ENST00000472679 FAM90A1Q86YD7 464 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 CPT1CQ8TCG5 803 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 SH3RF3Q8TEJ3 882 aaPredicted RBP7.24□□□□□ -1.25
CLK1-209ENST00000472679 ZNF768Q9H5H4 540 aaKnown RBP7.24□□□□□ -1.25
CLK1-209ENST00000472679 OBP2AQ9NY56 170 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 GOLGA6AQ9NYA3 693 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 CHST2Q9Y4C5 530 aa7.24□□□□□ -1.25
CLK1-209ENST00000472679 CCDC78A2IDD5 438 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 PRSS29PA6NIE9 313 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 H3BUI4 141 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 ERC2O15083 957 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 TUSC2O75896 110 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 SCAF4O95104 1147 aaKnown RBP7.23□□□□□ -1.25
CLK1-209ENST00000472679 ARIH2O95376 493 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 ADRB1P08588 477 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 ALAS1P13196 640 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 NOMO3P69849 1222 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 FAM189BP81408 668 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 DGCR2P98153 550 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 NOMO2Q5JPE7 1267 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 AGAP9Q5VTM2 703 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 PPP1R3BQ86XI6 285 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 CDK5RAP3Q96JB5 506 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 FAM193BQ96PV7 902 aaPredicted RBP7.23□□□□□ -1.25
CLK1-209ENST00000472679 GPR20Q99678 358 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 PACSIN1Q9BY11 444 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 PNPOQ9NVS9 261 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 AURKAIP1Q9NWT8 199 aaPredicted RBP7.23□□□□□ -1.25
CLK1-209ENST00000472679 TRPM5Q9NZQ8 1165 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 USP15Q9Y4E8 981 aaPredicted RBP7.23□□□□□ -1.25
CLK1-209ENST00000472679 PCDHA1Q9Y5I3 950 aa7.23□□□□□ -1.25
CLK1-209ENST00000472679 C1QTNF3-AMACRE9PGA6 284 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 HAUS5O94927 633 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 PHKA1P46020 1223 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 LLGL1Q15334 1064 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 PDCD4Q53EL6 469 aaKnown RBP7.22□□□□□ -1.25
CLK1-209ENST00000472679 CCDC93Q567U6 631 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 UTP14CQ5TAP6 766 aaKnown RBP7.22□□□□□ -1.25
CLK1-209ENST00000472679 TSHZ3Q63HK5 1081 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 FITM2Q8N6M3 262 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 CELF5Q8N6W0 485 aaKnown RBP7.22□□□□□ -1.25
CLK1-209ENST00000472679 NLGN4YQ8NFZ3 816 aaPredicted RBP7.22□□□□□ -1.25
CLK1-209ENST00000472679 TBC1D15Q8TC07 691 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 SLC35A4Q96G79 324 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 C8orf48Q96LL4 319 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 NT5C1BQ96P26 610 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 B3GNT5Q9BYG0 378 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 MRPL46Q9H2W6 279 aaKnown RBP7.22□□□□□ -1.25
CLK1-209ENST00000472679 ZNF703Q9H7S9 590 aaPredicted RBP7.22□□□□□ -1.25
CLK1-209ENST00000472679 C1orf112Q9NSG2 853 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 JKAMPQ9P055 326 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 STAP2Q9UGK3 403 aa7.22□□□□□ -1.25
CLK1-209ENST00000472679 FEZ2Q9UHY8 353 aaPredicted RBP7.22□□□□□ -1.25
CLK1-209ENST00000472679 TRIM24O15164 1050 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 AGFG2O95081 481 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 AHSGP02765 367 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 FTH1P19P0C7X4 201 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 NR4A1P22736 598 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 GCSHP23434 173 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms