RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 LRRC14BA6NHZ5 514 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 PRRG2O14669 202 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 HAUS5O94927 633 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 SCAF4O95104 1147 aaKnown RBP5.94□□□□□ -1.46
CDHR3-208ENST00000471910 ALDH2P05091 517 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 CHN2P52757 468 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 RABL3Q5HYI8 236 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 DAAM2Q86T65 1068 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 DCBLD1Q8N8Z6 715 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 TTC8Q8TAM2 541 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 KLHDC4Q8TBB5 520 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 ACO2Q99798 780 aaKnown RBP5.94□□□□□ -1.46
CDHR3-208ENST00000471910 PCGF6Q9BYE7 350 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 PRDM11Q9NQV5 511 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 GEMIN8Q9NWZ8 242 aaKnown RBP5.94□□□□□ -1.46
CDHR3-208ENST00000471910 ATP11BQ9Y2G3 1177 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 NR2E3Q9Y5X4 410 aa5.94□□□□□ -1.46
CDHR3-208ENST00000471910 C1QTNF3-AMACRE9PGA6 284 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 F2RL2O00254 374 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 UBXN7O94888 489 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 ITGB1P05556 798 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 CKBP12277 381 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 TYRP14679 529 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 HTR1BP28222 390 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 APOBEC3AP31941 199 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-208ENST00000471910 CSRP2Q16527 193 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 PPP4R4Q6NUP7 873 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 SH2D3CQ8N5H7 860 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 TBC1D15Q8TC07 691 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 CPT1CQ8TCG5 803 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 SH3RF3Q8TEJ3 882 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-208ENST00000471910 RUNDC1Q96C34 613 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 C8orf48Q96LL4 319 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 ZNF703Q9H7S9 590 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-208ENST00000471910 FAM204AQ9H8W3 233 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 SARS2Q9NP81 518 aaKnown RBP5.93□□□□□ -1.46
CDHR3-208ENST00000471910 CNNM1Q9NRU3 951 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 FBXO34Q9NWN3 711 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 TRPM5Q9NZQ8 1165 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 JKAMPQ9P055 326 aa5.93□□□□□ -1.46
CDHR3-208ENST00000471910 ARID1BQ8NFD5 2236 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-208ENST00000471910 VSTM5A8MXK1 200 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 LEFTY2O00292 366 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 KIF3BO15066 747 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 SLC43A1O75387 559 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 ANXA1P04083 346 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 RNASE9P60153 205 aaKnown RBP5.92□□□□□ -1.46
CDHR3-208ENST00000471910 MXRA7P84157 204 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 FGL2Q14314 439 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 CDSNQ15517 529 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 UTP14CQ5TAP6 766 aaKnown RBP5.92□□□□□ -1.46
CDHR3-208ENST00000471910 TSHZ3Q63HK5 1081 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 RNF207Q6ZRF8 634 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 GDF7Q7Z4P5 450 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 SYT12Q8IV01 421 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 RHOT2Q8IXI1 618 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 ZBTB34Q8NCN2 500 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 IL17DQ8TAD2 202 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 BRIX1Q8TDN6 353 aaKnown RBP5.92□□□□□ -1.46
CDHR3-208ENST00000471910 NUP133Q8WUM0 1156 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 SLC35A4Q96G79 324 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 PLEKHG4BQ96PX9 1271 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 BRD9Q9H8M2 597 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 CFAP97Q9P2B7 532 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 USP15Q9Y4E8 981 aaPredicted RBP5.92□□□□□ -1.46
CDHR3-208ENST00000471910 NCANO14594 1321 aa5.92□□□□□ -1.46
CDHR3-208ENST00000471910 CDHR4A6H8M9 788 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 NT5C1B-RDH14C9J2C7 533 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 B3GALT2O43825 422 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 PPFIA4O75335 1185 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 TUSC2O75896 110 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 HLA-DOAP06340 250 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 SBK3P0C264 359 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 PRDX5P30044 214 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 PIK3CGP48736 1102 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 NKX6-1P78426 367 aaPredicted RBP5.91□□□□□ -1.46
CDHR3-208ENST00000471910 CCDC93Q567U6 631 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 FOXR2Q6PJQ5 311 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 ZNF365Q70YC5 407 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 PPP1R35Q8TAP8 253 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 SLC46A2Q9BY10 475 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 RNPEPQ9H4A4 650 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 RLIMQ9NVW2 624 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 OBP2AQ9NY56 170 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 GABBR1Q9UBS5 961 aa5.91□□□□□ -1.46
CDHR3-208ENST00000471910 A0A088AWK7 358 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 GAGE12BA1L429 117 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 GAGE12HA6NDE8 117 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 RNASET2O00584 256 aaKnown RBP5.9□□□□□ -1.46
CDHR3-208ENST00000471910 PLSCR1O15162 318 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 FAM20BO75063 409 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 RPS6KA4O75676 772 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 AGFG2O95081 481 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 PEX11BO96011 259 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 GCSHP23434 173 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 SLC6A2P23975 617 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 GPSM2P81274 684 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 TOB2Q14106 344 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-208ENST00000471910 PLS1Q14651 629 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms