RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 HPS3Q969F9 1004 aa7□□□□□ -1.29
XRN1-207ENST00000468894 RGMAQ96B86 450 aa7□□□□□ -1.29
XRN1-207ENST00000468894 MVB12AQ96EY5 273 aa7□□□□□ -1.29
XRN1-207ENST00000468894 GSTO2Q9H4Y5 243 aa7□□□□□ -1.29
XRN1-207ENST00000468894 NRDE2Q9H7Z3 1164 aa7□□□□□ -1.29
XRN1-207ENST00000468894 MMRN2Q9H8L6 949 aa7□□□□□ -1.29
XRN1-207ENST00000468894 AKIP1Q9NQ31 210 aa7□□□□□ -1.29
XRN1-207ENST00000468894 RNASET2O00584 256 aaKnown RBP6.99□□□□□ -1.29
XRN1-207ENST00000468894 MTHFD1P11586 935 aaKnown RBP6.99□□□□□ -1.29
XRN1-207ENST00000468894 SLFN5Q08AF3 891 aa6.99□□□□□ -1.29
XRN1-207ENST00000468894 SNAPC2Q13487 334 aa6.99□□□□□ -1.29
XRN1-207ENST00000468894 ZNF267Q14586 743 aaPredicted RBP6.99□□□□□ -1.29
XRN1-207ENST00000468894 NFE2Q16621 373 aaPredicted RBP6.99□□□□□ -1.29
XRN1-207ENST00000468894 BEAN1Q3B7T3 259 aa6.99□□□□□ -1.29
XRN1-207ENST00000468894 ATAT1Q5SQI0 421 aa6.99□□□□□ -1.29
XRN1-207ENST00000468894 IFIT1BQ5T764 474 aaKnown RBP6.99□□□□□ -1.29
XRN1-207ENST00000468894 SLC4A10Q6U841 1118 aa6.99□□□□□ -1.29
XRN1-207ENST00000468894 LENG9Q96B70 501 aa6.99□□□□□ -1.29
XRN1-207ENST00000468894 ZSWIM1Q9BR11 485 aa6.99□□□□□ -1.29
XRN1-207ENST00000468894 FZD1Q9UP38 647 aa6.99□□□□□ -1.29
XRN1-207ENST00000468894 REXO2Q9Y3B8 237 aaKnown RBP6.99□□□□□ -1.29
XRN1-207ENST00000468894 EID1Q9Y6B2 187 aa6.99□□□□□ -1.29
XRN1-207ENST00000468894 GAGE12BA1L429 117 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 GAGE12HA6NDE8 117 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 FTLP02792 175 aaPredicted RBP6.98□□□□□ -1.29
XRN1-207ENST00000468894 ELANEP08246 267 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 SPATA31D3P0C874 917 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 PTGS2P35354 604 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 MAP2K6P52564 334 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 NOMO3P69849 1222 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 OCA2Q04671 838 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 NOGQ13253 232 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 NOMO2Q5JPE7 1267 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 TSHZ3Q63HK5 1081 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 SPATA31D4Q6ZUB0 917 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 FITM2Q8N6M3 262 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 C3orf20Q8ND61 904 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 IL17RDQ8NFM7 739 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 NLGN4YQ8NFZ3 816 aaPredicted RBP6.98□□□□□ -1.29
XRN1-207ENST00000468894 CLIP3Q96DZ5 547 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 AIFM3Q96NN9 605 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 G3BP2Q9UN86 482 aaKnown RBP6.98□□□□□ -1.29
XRN1-207ENST00000468894 ATP11BQ9Y2G3 1177 aa6.98□□□□□ -1.29
XRN1-207ENST00000468894 F2RL2O00254 374 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 PPM1GO15355 546 aaPredicted RBP6.97□□□□□ -1.29
XRN1-207ENST00000468894 SLC16A6O15403 523 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 FZD7O75084 574 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 OFD1O75665 1012 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 LAG3P18627 525 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 LPOP22079 712 aaPredicted RBP6.97□□□□□ -1.29
XRN1-207ENST00000468894 FGFR4P22455 802 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 CYP2C19P33261 490 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 HK3P52790 923 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 PPP2R5AQ15172 486 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 ZNF365Q70YC5 407 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 EPM2AIP1Q7L775 607 aaPredicted RBP6.97□□□□□ -1.29
XRN1-207ENST00000468894 MRGPREQ86SM8 312 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 GRAMD1CQ8IYS0 662 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 TBC1D15Q8TC07 691 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 DIS3LQ8TF46 1054 aaKnown RBP6.97□□□□□ -1.29
XRN1-207ENST00000468894 HAS1Q92839 578 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 MYEOVQ96EZ4 313 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 MAP3K14Q99558 947 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 ADAM2Q99965 735 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 MLST8Q9BVC4 326 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 PACSIN1Q9BY11 444 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 REXO4Q9GZR2 422 aaKnown RBP6.97□□□□□ -1.29
XRN1-207ENST00000468894 SCAND2PQ9GZW5 306 aaPredicted RBP6.97□□□□□ -1.29
XRN1-207ENST00000468894 NMRK2Q9NPI5 230 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 ANLNQ9NQW6 1124 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 JKAMPQ9P055 326 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 KLHL42Q9P2K6 505 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 DKK2Q9UBU2 259 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 SLC45A2Q9UMX9 530 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 POLHQ9Y253 713 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 MAP3K2Q9Y2U5 619 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 PCDHA3Q9Y5H8 950 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 HS3ST4Q9Y661 456 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 HS3ST3A1Q9Y663 406 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 FPGT-TNNI3KV9GXZ4 949 aa6.97□□□□□ -1.29
XRN1-207ENST00000468894 CENPVL1A0A0U1RR11 272 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 A0A1B0GTW7 788 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 PRPF3O43395 683 aaKnown RBP6.96□□□□□ -1.3
XRN1-207ENST00000468894 LPXNO60711 386 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 SLC43A1O75387 559 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 NDUFA10O95299 355 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 CFIP05156 583 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 FCER1AP12319 257 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 ACVRL1P37023 503 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 ABHD18Q0P651 414 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 THEMIS2Q5TEJ8 643 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 B3GNT9Q6UX72 402 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 HEATR3Q7Z4Q2 680 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 MAPKAPK5Q8IW41 473 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 SYNE4Q8N205 404 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 CPEB3Q8NE35 698 aaKnown RBP6.96□□□□□ -1.3
XRN1-207ENST00000468894 NUP133Q8WUM0 1156 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 LRGUKQ96M69 825 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 RNPEPQ9H4A4 650 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 MAN1C1Q9NR34 630 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms