RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CCR2P41597 374 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 ARHGAP29Q52LW3 1261 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 TOGARAM2Q6ZUX3 1019 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 NIPA1Q7RTP0 329 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 SYT12Q8IV01 421 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 ELMOD1Q8N336 334 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 NLRP4Q96MN2 994 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 SPZ1Q9BXG8 430 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 TBC1D22BQ9NU19 505 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 POLR3BQ9NW08 1133 aaPredicted RBP13.04□□□□□ -0.32
VPS26A-204ENST00000467852 SUCLA2Q9P2R7 463 aaPredicted RBP13.04□□□□□ -0.32
VPS26A-204ENST00000467852 GIT1Q9Y2X7 761 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 ANKRD17O75179 2603 aaKnown RBP13.03□□□□□ -0.32
VPS26A-204ENST00000467852 PRRG1O14668 218 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 RNF40O75150 1001 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 ITPKBP27987 946 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 GFPT1Q06210 699 aaPredicted RBP13.03□□□□□ -0.32
VPS26A-204ENST00000467852 TAF1BQ53T94 588 aaPredicted RBP13.03□□□□□ -0.32
VPS26A-204ENST00000467852 IQCEQ6IPM2 695 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 TMPRSS7Q7RTY8 843 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 GPR155Q7Z3F1 870 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 HASPINQ8TF76 798 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 ARID3AQ99856 593 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 CDY1Q9Y6F8 540 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 NCANO14594 1321 aa13.03□□□□□ -0.32
VPS26A-204ENST00000467852 DOPEY1Q5JWR5 2465 aa13.02□□□□□ -0.32
VPS26A-204ENST00000467852 TSC2P49815 1807 aa13.02□□□□□ -0.32
VPS26A-204ENST00000467852 ERICH2A1L162 156 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 B8ZZF3 427 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 DPYSL4O14531 572 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 TNFRSF10BO14763 440 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 CFIP05156 583 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 CD59P13987 128 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 SMARCA1P28370 1054 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 HOXA11P31270 313 aaPredicted RBP13.02□□□□□ -0.33
VPS26A-204ENST00000467852 PRKCEQ02156 737 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 GRIK3Q13003 919 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 IMMTQ16891 758 aaKnown RBP13.02□□□□□ -0.33
VPS26A-204ENST00000467852 TMEM196Q5HYL7 178 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 LPCAT2Q7L5N7 544 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 SYT13Q7L8C5 426 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 KSR1Q8IVT5 923 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 LEMD2Q8NC56 503 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 SPATA18Q8TC71 538 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 ZNF512Q96ME7 567 aaPredicted RBP13.02□□□□□ -0.33
VPS26A-204ENST00000467852 WDR70Q9NW82 654 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 SNTG2Q9NY99 539 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 SLC6A14Q9UN76 642 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 SALL3Q9BXA9 1300 aa13.02□□□□□ -0.33
VPS26A-204ENST00000467852 SH3BP5O60239 455 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 FOSP01100 380 aaPredicted RBP13.01□□□□□ -0.33
VPS26A-204ENST00000467852 MYL4P12829 197 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 BCKDHBP21953 392 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 CSRP3P50461 194 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 NMIQ13287 307 aaPredicted RBP13.01□□□□□ -0.33
VPS26A-204ENST00000467852 SLC14A1Q13336 389 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 DMC1Q14565 340 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 ITPRIPL2Q3MIP1 535 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 COLEC12Q5KU26 742 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 FSTL4Q6MZW2 842 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.01□□□□□ -0.33
VPS26A-204ENST00000467852 SRGAP1Q7Z6B7 1085 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 CATIPQ7Z7H3 387 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 MINDY1Q8N5J2 469 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 CEP76Q8TAP6 659 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 RSPRY1Q96DX4 576 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 ZFYVE19Q96K21 471 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 CAMK1GQ96NX5 476 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 ZNF577Q9BSK1 485 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 IFT122Q9HBG6 1241 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 TMEM74BQ9NUR3 256 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 KIAA1522Q9P206 1035 aaPredicted RBP13.01□□□□□ -0.33
VPS26A-204ENST00000467852 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 HES2Q9Y543 173 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 ZMYM2Q9UBW7 1377 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 TNRC6BQ9UPQ9 1833 aaKnown RBP13.01□□□□□ -0.33
VPS26A-204ENST00000467852 ATMQ13315 3056 aa13.01□□□□□ -0.33
VPS26A-204ENST00000467852 KNTC1P50748 2209 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 FAM205CA6NFA0 338 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
VPS26A-204ENST00000467852 MOSPD3O75425 235 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 KRT38O76015 456 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 GJA1P17302 382 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 MX1P20591 662 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 TEAD2Q15562 447 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 TARBP2Q15633 366 aaKnown RBP13□□□□□ -0.33
VPS26A-204ENST00000467852 DUOXA1Q1HG43 343 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 MTERF2Q49AM1 385 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 CYB5R4Q7L1T6 521 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 SLCO6A1Q86UG4 719 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 TICAM2Q86XR7 235 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 TSTD1Q8NFU3 115 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 RPLP0P6Q8NHW5 317 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 ZNF461Q8TAF7 563 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 ACDQ96AP0 544 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 PGBD1Q96JS3 809 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 LZTS2Q9BRK4 669 aa13□□□□□ -0.33
VPS26A-204ENST00000467852 PAAF1Q9BRP4 392 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms