RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 CARNS1A5YM72 827 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 CASTOR2A6NHX0 329 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 KCNJ18B7U540 433 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 STX10O60499 249 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 B4GALT3O60512 393 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 ZC3H11AO75152 810 aaKnown RBP eCLIP18.46■□□□□ 0.55
VARS2-204ENST00000467717 TNNC2P02585 160 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 ALDH2P05091 517 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 CA3P07451 260 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 TRIM49P0CI25 452 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 TRIM49CP0CI26 452 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 LAG3P18627 525 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 GTF2H1P32780 548 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 RPL9P32969 192 aaKnown RBP18.46■□□□□ 0.55
VARS2-204ENST00000467717 ALDH7A1P49419 539 aaKnown RBP18.46■□□□□ 0.55
VARS2-204ENST00000467717 SOX4Q06945 474 aaPredicted RBP18.46■□□□□ 0.55
VARS2-204ENST00000467717 KCNJ12Q14500 433 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 HSP90AA4PQ58FG1 418 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 C1orf220Q5T0J3 134 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 TCERG1LQ5VWI1 586 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 CLP1Q92989 425 aaKnown RBP18.46■□□□□ 0.55
VARS2-204ENST00000467717 SLC35C1Q96A29 364 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 DDX27Q96GQ7 796 aaKnown RBP18.46■□□□□ 0.55
VARS2-204ENST00000467717 AAASQ9NRG9 546 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 DPP3Q9NY33 737 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 DNAJB4Q9UDY4 337 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 YBX2Q9Y2T7 364 aaKnown RBP18.46■□□□□ 0.55
VARS2-204ENST00000467717 RWDD3Q9Y3V2 267 aa18.46■□□□□ 0.55
VARS2-204ENST00000467717 GALTP07902 379 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 ZNF18P17022 549 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 LRPAP1P30533 357 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 MTIF2P46199 727 aaKnown RBP18.45■□□□□ 0.54
VARS2-204ENST00000467717 OR1G1P47890 313 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 GUCY2FP51841 1108 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 BCAR1P56945 870 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 TPM4P67936 248 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 PPP3CAQ08209 521 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 TCP11X2Q5H9J9 407 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 TRAPPC11Q7Z392 1133 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 LUZP1Q86V48 1076 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 ZNF516Q92618 1163 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 FAM84AQ96KN4 292 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 ZNF558Q96NG5 402 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 HSD3B7Q9H2F3 369 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 GOLGA2P5Q9HBQ8 144 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 ITGA11Q9UKX5 1188 aa18.45■□□□□ 0.54
VARS2-204ENST00000467717 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.45■□□□□ 0.54
VARS2-204ENST00000467717 GOLGA6L19H0YKK7 550 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 PODXLO00592 558 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 C4BPAP04003 597 aaKnown RBP18.44■□□□□ 0.54
VARS2-204ENST00000467717 LINC00271P0C7V0 271 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 CDK11BP21127 795 aaKnown RBP18.44■□□□□ 0.54
VARS2-204ENST00000467717 GCLMP48507 274 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 SLC11A1P49279 550 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 CLCNKBP51801 687 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 BIRC3Q13489 604 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 UPP1Q16831 310 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 C9orf57Q5W0N0 161 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 DCLRE1AQ6PJP8 1040 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 KCNT2Q6UVM3 1135 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 SV2AQ7L0J3 742 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 C1orf127Q8N9H9 656 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 ANKRD20A12PQ8NF67 263 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 COLEC11Q9BWP8 271 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 TMEM8AQ9HCN3 771 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 MTMR10Q9NXD2 777 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 FAN1Q9Y2M0 1017 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 R3HCC1Q9Y3T6 440 aaKnown RBP18.44■□□□□ 0.54
VARS2-204ENST00000467717 PCDHB12Q9Y5F1 795 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 COL4A6Q14031 1691 aa18.44■□□□□ 0.54
VARS2-204ENST00000467717 NRP1O14786 923 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 ITGB3P05106 788 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 DNAJB2P25686 324 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 BMPR1AP36894 532 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 MXI1P50539 228 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 RBP5P82980 135 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 ZACNQ401N2 412 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 TDRD10Q5VZ19 366 aaKnown RBP18.43■□□□□ 0.54
VARS2-204ENST00000467717 KRT39Q6A163 491 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 C15orf39Q6ZRI6 1047 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.43■□□□□ 0.54
VARS2-204ENST00000467717 COLGALT1Q8NBJ5 622 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 CXorf38Q8TB03 319 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 TIFAQ96CG3 184 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 SAMD11Q96NU1 681 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 TGS1Q96RS0 853 aaKnown RBP18.43■□□□□ 0.54
VARS2-204ENST00000467717 PAAF1Q9BRP4 392 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 TUBGCP2Q9BSJ2 902 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 NKX2-4Q9H2Z4 354 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 MMRN2Q9H8L6 949 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 SLC28A3Q9HAS3 691 aa18.43■□□□□ 0.54
VARS2-204ENST00000467717 PRG3Q9Y2Y8 225 aaPredicted RBP18.43■□□□□ 0.54
VARS2-204ENST00000467717 ANO9A1A5B4 782 aa18.42■□□□□ 0.54
VARS2-204ENST00000467717 PIRO00625 290 aa18.42■□□□□ 0.54
VARS2-204ENST00000467717 N4BP1O75113 896 aaKnown RBP18.42■□□□□ 0.54
VARS2-204ENST00000467717 PHACTR2O75167 634 aa18.42■□□□□ 0.54
VARS2-204ENST00000467717 B3GAT3O94766 335 aa18.42■□□□□ 0.54
VARS2-204ENST00000467717 ARHGEF15O94989 841 aa18.42■□□□□ 0.54
VARS2-204ENST00000467717 AFPP02771 609 aaKnown RBP18.42■□□□□ 0.54
VARS2-204ENST00000467717 KRT19P08727 400 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms