RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 A0A1B0GTW7 788 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 CCDC78A2IDD5 438 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 UNC119BA6NIH7 251 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 FOXN1O15353 648 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 CKBP12277 381 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 DDX6P26196 483 aaKnown RBP eCLIP5.16□□□□□ -1.58
VPS13D-203ENST00000466732 ZNF280AP59817 542 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-203ENST00000466732 EXOSC10Q01780 885 aaKnown RBP5.16□□□□□ -1.58
VPS13D-203ENST00000466732 GUCY1B3Q02153 619 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 OCA2Q04671 838 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 ATP2B3Q16720 1220 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 B3GNTL1Q67FW5 361 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-203ENST00000466732 TMEM132CQ8N3T6 1108 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 FITM2Q8N6M3 262 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 CLPTM1LQ96KA5 538 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 DMRTA2Q96SC8 542 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 CEP89Q96ST8 783 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 TTPALQ9BTX7 342 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 WDR11Q9BZH6 1224 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 RNPEPQ9H4A4 650 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 SERHL2Q9H4I8 314 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 WDR33Q9C0J8 1336 aaKnown RBP5.16□□□□□ -1.58
VPS13D-203ENST00000466732 AATKQ6ZMQ8 1374 aa5.16□□□□□ -1.58
VPS13D-203ENST00000466732 CDHR4A6H8M9 788 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 GRM6O15303 877 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 RAMP2O60895 175 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 SNUPNO95149 360 aaKnown RBP5.15□□□□□ -1.59
VPS13D-203ENST00000466732 SBK3P0C264 359 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 FGFR4P22455 802 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 SLC6A4P31645 630 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 ZEB1P37275 1124 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-203ENST00000466732 NOMO3P69849 1222 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 TP53BP2Q13625 1128 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 RAB39AQ14964 217 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 PABPC1LQ4VXU2 614 aaKnown RBP5.15□□□□□ -1.59
VPS13D-203ENST00000466732 NOMO2Q5JPE7 1267 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 PCSK4Q6UW60 755 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 ZBTB46Q86UZ6 589 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 CMTR2Q8IYT2 770 aaKnown RBP5.15□□□□□ -1.59
VPS13D-203ENST00000466732 MIER2Q8N344 545 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 NLGN4YQ8NFZ3 816 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-203ENST00000466732 TBC1D15Q8TC07 691 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 NUP133Q8WUM0 1156 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 CHMP4CQ96CF2 233 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 MARS2Q96GW9 593 aaKnown RBP5.15□□□□□ -1.59
VPS13D-203ENST00000466732 CFAP20Q9Y6A4 193 aaKnown RBP5.15□□□□□ -1.59
VPS13D-203ENST00000466732 COL4A3Q01955 1670 aa5.15□□□□□ -1.59
VPS13D-203ENST00000466732 LOC105371045A0A1W2PR82 267 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 GRID2IPA4D2P6 1211 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 B3GALT2O43825 422 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 CDKL5O76039 1030 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 HAUS5O94927 633 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 SPDEFO95238 335 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 GPANK1O95872 356 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 MTHFD1P11586 935 aaKnown RBP5.14□□□□□ -1.59
VPS13D-203ENST00000466732 NEK2P51955 445 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 ANAPC15P60006 121 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 HSD11B2P80365 405 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 MXRA7P84157 204 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 DSC2Q02487 901 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 TLE1Q04724 770 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 FSTL1Q12841 308 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 TMEM240Q5SV17 173 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 ARMC6Q6NXE6 501 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 GADL1Q6ZQY3 521 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 TTC7BQ86TV6 843 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 NSUN6Q8TEA1 469 aaKnown RBP5.14□□□□□ -1.59
VPS13D-203ENST00000466732 ALOXE3Q9BYJ1 711 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 CALCOCO1Q9P1Z2 691 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 USP25Q9UHP3 1055 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 DMRT1Q9Y5R6 373 aa5.14□□□□□ -1.59
VPS13D-203ENST00000466732 PIPSLA2A3N6 862 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 RPLP2P05387 115 aaKnown RBP5.13□□□□□ -1.59
VPS13D-203ENST00000466732 CD1AP06126 327 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 SLFN5Q08AF3 891 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 SPDYE7PQ495Y7 208 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 Q6YL49 198 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 FAM43AQ8N2R8 423 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 CPA6Q8N4T0 437 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 IL17RDQ8NFM7 739 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 ASB10Q8WXI3 467 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 RNF31Q96EP0 1072 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 AGAP2Q99490 1192 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 SLITRK6Q9H5Y7 841 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 CYP4F11Q9HBI6 524 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 TYW1Q9NV66 732 aaKnown RBP5.13□□□□□ -1.59
VPS13D-203ENST00000466732 HSFX1Q9UBD0 423 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 LUC7L2Q9Y383 392 aaKnown RBP5.13□□□□□ -1.59
VPS13D-203ENST00000466732 NOX1Q9Y5S8 564 aa5.13□□□□□ -1.59
VPS13D-203ENST00000466732 FOSP01100 380 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-203ENST00000466732 GCP02774 474 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 EGR2P11161 476 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-203ENST00000466732 FCER1AP12319 257 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 PDCP20941 246 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 CXADRP78310 365 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 IGBP1P78318 339 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 PURAQ00577 322 aaKnown RBP5.12□□□□□ -1.59
VPS13D-203ENST00000466732 TAP1Q03518 808 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 SCAPQ12770 1279 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 FLYWCH1Q4VC44 716 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms