RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PARD3BQ8TEW8 1205 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 MRGPRX1Q96LB2 322 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 ZNF512Q96ME7 567 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 NDC1Q9BTX1 674 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 SELENOOQ9BVL4 669 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 UNKQ9C0B0 810 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 RSAD1Q9HA92 442 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 ZNF287Q9HBT7 754 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 USP40Q9NVE5 1235 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 JKAMPQ9P055 326 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 CFAP97Q9P2B7 532 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 HECAQ9UBI9 543 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 STAP2Q9UGK3 403 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 SLC23A1Q9UHI7 598 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 CPA4Q9UI42 421 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 OGDHLQ9ULD0 1010 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 PCDHA6Q9UN73 950 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 HDAC5Q9UQL6 1122 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 PAXBP1Q9Y5B6 917 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 WNT10BO00744 389 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 LAMTOR5O43504 91 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 MFAP3LO75121 409 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 MYL3P08590 195 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 SETSIPP0DME0 302 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 KITP10721 976 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 EN2P19622 333 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 SLC7A1P30825 629 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 ARFIP2P53365 341 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 KIF22Q14807 665 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 GRM7Q14831 915 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 LONRF1Q17RB8 773 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 CCDC93Q567U6 631 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 FKBP15Q5T1M5 1219 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 DRICH1Q6PGQ1 229 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 GPRIN1Q7Z2K8 1008 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 EXOC8Q8IYI6 725 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 DDX17Q92841 729 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 MSLNLQ96KJ4 702 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 DPYSL5Q9BPU6 564 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 APOL5Q9BWW9 433 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 PACSIN1Q9BY11 444 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 BRD9Q9H8M2 597 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 STARD7Q9NQZ5 370 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 TAGLN3Q9UI15 199 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 PADI4Q9UM07 663 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 RUVBL1Q9Y265 456 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 USP19O94966 1318 aa5.39□□□□□ -1.55
CDC42BPA-211ENST00000466538 PRR5-ARHGAP8B1AHC4 643 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 RASA4BC9J798 803 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 IFRD1O00458 451 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 RASA4O43374 803 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 MATN4O95460 622 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 C8AP07357 584 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 NPR1P16066 1061 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 CASP5P51878 434 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 MXRA7P84157 204 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 DUSP8Q13202 625 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 HABP2Q14520 560 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 ZNF124Q15973 351 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 XP32Q5T750 250 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 ZNF529Q6P280 563 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 TAX1BP1Q86VP1 789 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 COL23A1Q86Y22 540 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 CERS3Q8IU89 383 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 LRRC56Q8IYG6 542 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 ENAHQ8N8S7 591 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 OR6B3Q8NGW1 331 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 DEPTORQ8TB45 409 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 SLC35B2Q8TB61 432 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 BRI3BPQ8WY22 251 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 TNPO1Q92973 898 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 NMD3Q96D46 503 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 MYOCQ99972 504 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 C1orf43Q9BWL3 253 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 TRIM54Q9BYV2 358 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 DPH1Q9BZG8 443 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 PLA2G3Q9NZ20 509 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 MED16Q9Y2X0 877 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 DAAM1Q9Y4D1 1078 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 SNX13Q9Y5W8 968 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 PNPLA7Q6ZV29 1317 aa5.38□□□□□ -1.55
CDC42BPA-211ENST00000466538 TCRBV7S2A1N4TA0A589 114 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 PRSS29PA6NIE9 313 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 DBX1A6NMT0 343 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 KIAA0391O15091 583 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 TBX3O15119 743 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 TBC1D4O60343 1298 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 IPO13O94829 963 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 IL18RAPO95256 599 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 SBK3P0C264 359 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 BRAFP15056 766 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 GNAT2P19087 354 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 HDCP19113 662 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 MGAT1P26572 445 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 CFPP27918 469 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 SERPINB3P29508 390 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 PRIM2P49643 509 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 SUMO3P55854 103 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 SOX8P57073 446 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms