RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 GUCA1BQ9UMX6 200 aa20.07■□□□□ 0.8
CAPN3-209ENST00000466222 PQBP1O60828 265 aaKnown RBP20.06■□□□□ 0.8
CAPN3-209ENST00000466222 CD52P31358 61 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 MXI1P50539 228 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 CCDC122Q5T0U0 273 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 NOTUMQ6P988 496 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 TRAF7Q6Q0C0 670 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 FAM126BQ8IXS8 530 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 NEK11Q8NG66 645 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 JAKMIP2Q96AA8 810 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 NXF3Q9H4D5 531 aaKnown RBP20.06■□□□□ 0.8
CAPN3-209ENST00000466222 SNTG2Q9NY99 539 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 PCDH10Q9P2E7 1040 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 ABL1P00519 1130 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 HNRNPH3P31942 346 aaKnown RBP20.06■□□□□ 0.8
CAPN3-209ENST00000466222 POLR2FP61218 127 aaKnown RBP20.06■□□□□ 0.8
CAPN3-209ENST00000466222 CLDN10P78369 228 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 MBTPS1Q14703 1052 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 SLC10A6Q3KNW5 377 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 FBXO47Q5MNV8 452 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 UBXN11Q5T124 520 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 TDRD10Q5VZ19 366 aaKnown RBP20.06■□□□□ 0.8
CAPN3-209ENST00000466222 SLC27A1Q6PCB7 646 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 TXLNBQ8N3L3 684 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 ADPGKQ9BRR6 497 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 INTS2Q9H0H0 1204 aaKnown RBP20.06■□□□□ 0.8
CAPN3-209ENST00000466222 GANQ9H2C0 597 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 RNF39Q9H2S5 420 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 ACBD3Q9H3P7 528 aa20.06■□□□□ 0.8
CAPN3-209ENST00000466222 LACTBL1A8MY62 500 aa20.05■□□□□ 0.8
CAPN3-209ENST00000466222 LPIN1Q14693 890 aa20.05■□□□□ 0.8
CAPN3-209ENST00000466222 PKN2Q16513 984 aaKnown RBP20.05■□□□□ 0.8
CAPN3-209ENST00000466222 KLHDC7AQ5VTJ3 777 aa20.05■□□□□ 0.8
CAPN3-209ENST00000466222 EFCAB13Q8IY85 973 aa20.05■□□□□ 0.8
CAPN3-209ENST00000466222 PNKPQ96T60 521 aa20.05■□□□□ 0.8
CAPN3-209ENST00000466222 PI4K2AQ9BTU6 479 aa20.05■□□□□ 0.8
CAPN3-209ENST00000466222 TMEM8AQ9HCN3 771 aa20.05■□□□□ 0.8
CAPN3-209ENST00000466222 PSD3Q9NYI0 1048 aa20.05■□□□□ 0.8
CAPN3-209ENST00000466222 CALCOCO1Q9P1Z2 691 aa20.05■□□□□ 0.8
CAPN3-209ENST00000466222 PADI3Q9ULW8 664 aa20.05■□□□□ 0.8
CAPN3-209ENST00000466222 L1RE1Q9UN81 338 aa20.05■□□□□ 0.8
CAPN3-209ENST00000466222 GTPBP10A4D1E9 387 aaKnown RBP20.04■□□□□ 0.8
CAPN3-209ENST00000466222 C4BPAP04003 597 aaKnown RBP20.04■□□□□ 0.8
CAPN3-209ENST00000466222 AKAP5P24588 427 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 EPC2Q52LR7 807 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 KRT39Q6A163 491 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 PHLDB3Q6NSJ2 640 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 BAP1Q92560 729 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 APOL6Q9BWW8 343 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 NHEJ1Q9H9Q4 299 aaPredicted RBP20.04■□□□□ 0.8
CAPN3-209ENST00000466222 RPF1Q9H9Y2 349 aaKnown RBP20.04■□□□□ 0.8
CAPN3-209ENST00000466222 SAR1BQ9Y6B6 198 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 TRIP12Q14669 1992 aaPredicted RBP20.04■□□□□ 0.8
CAPN3-209ENST00000466222 SIP14410 1827 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 POLR3GO15318 223 aaPredicted RBP20.04■□□□□ 0.8
CAPN3-209ENST00000466222 CLTAP09496 248 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 UCHL3P15374 230 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 GJA8P48165 433 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 SLC39A5Q6ZMH5 540 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 C15orf39Q6ZRI6 1047 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 RRAGAQ7L523 313 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 CGRRF1Q99675 332 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 MTMR12Q9C0I1 747 aa20.04■□□□□ 0.8
CAPN3-209ENST00000466222 UMODL1Q5DID0 1318 aa20.03■□□□□ 0.8
CAPN3-209ENST00000466222 MGEA5O60502 916 aa20.03■□□□□ 0.8
CAPN3-209ENST00000466222 VNN1O95497 513 aa20.03■□□□□ 0.8
CAPN3-209ENST00000466222 CD4P01730 458 aa20.03■□□□□ 0.8
CAPN3-209ENST00000466222 NFICP08651 508 aa20.03■□□□□ 0.8
CAPN3-209ENST00000466222 TFAMQ00059 246 aaKnown RBP20.03■□□□□ 0.8
CAPN3-209ENST00000466222 PCBP1Q15365 356 aaKnown RBP eCLIP20.03■□□□□ 0.8
CAPN3-209ENST00000466222 TWF2Q6IBS0 349 aaKnown RBP20.03■□□□□ 0.8
CAPN3-209ENST00000466222 EXOC4Q96A65 974 aa20.03■□□□□ 0.8
CAPN3-209ENST00000466222 TRIM6Q9C030 488 aaPredicted RBP20.03■□□□□ 0.8
CAPN3-209ENST00000466222 TARSL2A2RTX5 802 aaKnown RBP20.02■□□□□ 0.8
CAPN3-209ENST00000466222 LRRC53A6NM62 1247 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 MEIS3P2A8K0S8 358 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 CST3P01034 146 aaPredicted RBP20.02■□□□□ 0.8
CAPN3-209ENST00000466222 IBSPP21815 317 aaPredicted RBP20.02■□□□□ 0.8
CAPN3-209ENST00000466222 VAV2P52735 878 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 BIRC3Q13489 604 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 ZACNQ401N2 412 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 FAM26DQ5JW98 314 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 IQCEQ6IPM2 695 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 ARHGEF19Q8IW93 802 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 SMG8Q8ND04 991 aaKnown RBP20.02■□□□□ 0.8
CAPN3-209ENST00000466222 KAT5Q92993 513 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 ACAP3Q96P50 834 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 EDEM3Q9BZQ6 932 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 ABCB6Q9NP58 842 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 PLCB1Q9NQ66 1216 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 RAB20Q9NX57 234 aa20.02■□□□□ 0.8
CAPN3-209ENST00000466222 AXLP30530 894 aa20.02■□□□□ 0.79
CAPN3-209ENST00000466222 GRM5P41594 1212 aa20.02■□□□□ 0.79
CAPN3-209ENST00000466222 SPA17Q15506 151 aa20.02■□□□□ 0.79
CAPN3-209ENST00000466222 DCAF4L1Q3SXM0 396 aa20.02■□□□□ 0.79
CAPN3-209ENST00000466222 MAP9Q49MG5 647 aa20.02■□□□□ 0.79
CAPN3-209ENST00000466222 JADE1Q6IE81 842 aa20.02■□□□□ 0.79
CAPN3-209ENST00000466222 CACNA2D4Q7Z3S7 1137 aa20.02■□□□□ 0.79
CAPN3-209ENST00000466222 USP37Q86T82 979 aa20.02■□□□□ 0.79
CAPN3-209ENST00000466222 PAWRQ96IZ0 340 aaKnown RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms