RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 CPEB3Q8NE35 698 aaKnown RBP4.05□□□□□ -1.76
CD55-207ENST00000465534 OR5M3Q8NGP4 307 aa4.05□□□□□ -1.76
CD55-207ENST00000465534 CHST2Q9Y4C5 530 aa4.05□□□□□ -1.76
CD55-207ENST00000465534 LAMA2P24043 3122 aaKnown RBP4.05□□□□□ -1.76
CD55-207ENST00000465534 HFM1A2PYH4 1435 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 CCDC144AA2RUR9 1427 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 ERBINQ96RT1 1412 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 EYSQ5T1H1 3165 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 NCOR1O75376 2440 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 DUOX2Q9NRD8 1548 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 CDC42BPBQ9Y5S2 1711 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 A0A0U1RQG5 324 aaPredicted RBP4.04□□□□□ -1.76
CD55-207ENST00000465534 GAGE12BA1L429 117 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 GAGE12HA6NDE8 117 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 GLTPD2A6NH11 291 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 TCF3P15923 654 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 CASRP41180 1078 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 RNASE9P60153 205 aaKnown RBP4.04□□□□□ -1.76
CD55-207ENST00000465534 GUCY1B3Q02153 619 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 NAP1L5Q96NT1 182 aaPredicted RBP4.04□□□□□ -1.76
CD55-207ENST00000465534 TEX101Q9BY14 249 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 OSBPL6Q9BZF3 934 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 CLCA2Q9UQC9 943 aa4.04□□□□□ -1.76
CD55-207ENST00000465534 TNPO3Q9Y5L0 923 aaKnown RBP4.04□□□□□ -1.76
CD55-207ENST00000465534 CCDC18Q5T9S5 1454 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 TUBGCP6Q96RT7 1819 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 PLEKHG1Q9ULL1 1385 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 LAMB2P55268 1798 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 A0A0A6YYJ9 748 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 TCRBV16S1A1N1A0A5B0 115 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 PIPSLA2A3N6 862 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 ALDH1A2O94788 518 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 APOL3O95236 402 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 GAAP10253 952 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 DEKP35659 375 aaKnown RBP4.03□□□□□ -1.76
CD55-207ENST00000465534 BMPR1AP36894 532 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 NHLH1Q02575 133 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 ADCY2Q08462 1091 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 FOXF2Q12947 444 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 ZNF174Q15697 407 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 TIGD7Q6NT04 549 aaPredicted RBP4.03□□□□□ -1.76
CD55-207ENST00000465534 FGD2Q7Z6J4 655 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 XYLT1Q86Y38 959 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 SCARB1Q8WTV0 552 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 SOX7Q9BT81 388 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 PITHD1Q9GZP4 211 aaPredicted RBP4.03□□□□□ -1.76
CD55-207ENST00000465534 MTG2Q9H4K7 406 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 TLK1Q9UKI8 766 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 SPATA31A1Q5TZJ5 1347 aa4.03□□□□□ -1.76
CD55-207ENST00000465534 PARP4Q9UKK3 1724 aaKnown RBP4.03□□□□□ -1.77
CD55-207ENST00000465534 MKI67P46013 3256 aaKnown RBP4.02□□□□□ -1.77
CD55-207ENST00000465534 ARFGEF1Q9Y6D6 1849 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 KIAA1107Q9UPP5 1409 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 SBF1O95248 1867 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 IGSF3O75054 1194 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 HLA-DOAP06340 250 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 PTX3P26022 381 aaPredicted RBP4.02□□□□□ -1.77
CD55-207ENST00000465534 NHLH2Q02577 135 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 ADCY1Q08828 1119 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 MRPL49Q13405 166 aaKnown RBP4.02□□□□□ -1.77
CD55-207ENST00000465534 TP53BP2Q13625 1128 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 DDB1Q16531 1140 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 TRIM61Q5EBN2 209 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 DOK3Q7L591 496 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 DDX53Q86TM3 631 aaKnown RBP4.02□□□□□ -1.77
CD55-207ENST00000465534 PLXDC1Q8IUK5 500 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 PIK3C3Q8NEB9 887 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 CAGE1Q8TC20 777 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 ASB10Q8WXI3 467 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 SMG7Q92540 1137 aaKnown RBP4.02□□□□□ -1.77
CD55-207ENST00000465534 IL17RAQ96F46 866 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 HIST1H2AHQ96KK5 128 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 ORAI2Q96SN7 254 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 HIST1H2AJQ99878 128 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 NOL10Q9BSC4 688 aaKnown RBP4.02□□□□□ -1.77
CD55-207ENST00000465534 ALG13Q9NP73 1137 aaKnown RBP4.02□□□□□ -1.77
CD55-207ENST00000465534 TBX22Q9Y458 520 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 PNPLA7Q6ZV29 1317 aa4.02□□□□□ -1.77
CD55-207ENST00000465534 ASH1LQ9NR48 2969 aaKnown RBP4.02□□□□□ -1.77
CD55-207ENST00000465534 PHRF1Q9P1Y6 1649 aaKnown RBP4.02□□□□□ -1.77
CD55-207ENST00000465534 COL3A1P02461 1466 aaPredicted RBP4.01□□□□□ -1.77
CD55-207ENST00000465534 KNDC1Q76NI1 1749 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 DNAJC9-AS1A6NH13 148 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 PRR5-ARHGAP8B1AHC4 643 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 DIRC3C9JPN6 131 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 H7C1D1 291 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 OPHN1O60890 802 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 ESRRBO95718 433 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 IGLV2-14P01704 120 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 ZSCAN20P17040 1043 aaPredicted RBP4.01□□□□□ -1.77
CD55-207ENST00000465534 CTGFP29279 349 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 MECP2P51608 486 aaKnown RBP4.01□□□□□ -1.77
CD55-207ENST00000465534 WNT3AP56704 352 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 BLOC1S1P78537 153 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 ST3GAL2Q16842 350 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 ABHD17BQ5VST6 288 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 SRRM1Q8IYB3 904 aaKnown RBP4.01□□□□□ -1.77
CD55-207ENST00000465534 MAFAQ8NHW3 353 aaPredicted RBP4.01□□□□□ -1.77
CD55-207ENST00000465534 PUS7Q96PZ0 661 aaKnown RBP4.01□□□□□ -1.77
CD55-207ENST00000465534 ADAM2Q99965 735 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms