RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 PTPN7P35236 360 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 PLA2G5P39877 138 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 ID4P47928 161 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 EVA1CP58658 441 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 PSMC1P62191 440 aaKnown RBP3.97□□□□□ -1.77
SNX4-202ENST00000465505 BLOC1S1P78537 153 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 CDK17Q00537 523 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 SATB1Q01826 763 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 NEXNQ0ZGT2 675 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 DHCR24Q15392 516 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 ARMC6Q6NXE6 501 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 ZNF572Q7Z3I7 529 aaPredicted RBP3.97□□□□□ -1.77
SNX4-202ENST00000465505 RHOT2Q8IXI1 618 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 TRMT2AQ8IZ69 625 aaKnown RBP3.97□□□□□ -1.77
SNX4-202ENST00000465505 TMEM132CQ8N3T6 1108 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 FAM98AQ8NCA5 519 aaKnown RBP3.97□□□□□ -1.77
SNX4-202ENST00000465505 CLRN3Q8NCR9 226 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 SIMC1Q8NDZ2 872 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 OR7D4Q8NG98 312 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 OR56A1Q8NGH5 318 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 USP7Q93009 1102 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 RAX2Q96IS3 184 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 ACAP3Q96P50 834 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 INO80BQ9C086 356 aaPredicted RBP3.97□□□□□ -1.77
SNX4-202ENST00000465505 BCO1Q9HAY6 547 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 IFT122Q9HBG6 1241 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 KLHL11Q9NVR0 708 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 ATP11BQ9Y2G3 1177 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 TBX22Q9Y458 520 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 INSL6Q9Y581 213 aa3.97□□□□□ -1.77
SNX4-202ENST00000465505 SALL3Q9BXA9 1300 aa3.96□□□□□ -1.77
SNX4-202ENST00000465505 ULK1O75385 1050 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 CDKL5O76039 1030 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 VIL1P09327 827 aaKnown RBP3.96□□□□□ -1.78
SNX4-202ENST00000465505 SNRPA1P09661 255 aaKnown RBP3.96□□□□□ -1.78
SNX4-202ENST00000465505 ALOX15P16050 662 aaPredicted RBP3.96□□□□□ -1.78
SNX4-202ENST00000465505 CXCR5P32302 372 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 CD151P48509 253 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 PTH2RP49190 550 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 SESN3P58005 492 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.96□□□□□ -1.78
SNX4-202ENST00000465505 EFCAB2Q5VUJ9 269 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 TSHZ3Q63HK5 1081 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 B3GNTL1Q67FW5 361 aaPredicted RBP3.96□□□□□ -1.78
SNX4-202ENST00000465505 SDE2Q6IQ49 451 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 MED25Q71SY5 747 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 RD3Q7Z3Z2 195 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 GPR149Q86SP6 731 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 RPAINQ86UA6 219 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 MAPKAPK5Q8IW41 473 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 CMIPQ8IY22 773 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 TSPEARQ8WU66 669 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 ITFG2Q969R8 447 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 FUBP1Q96AE4 644 aaKnown RBP3.96□□□□□ -1.78
SNX4-202ENST00000465505 PHACTR3Q96KR7 559 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 FAM210AQ96ND0 272 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 IFT22Q9H7X7 185 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 ADARB2Q9NS39 739 aaKnown RBP3.96□□□□□ -1.78
SNX4-202ENST00000465505 RBM28Q9NW13 759 aaKnown RBP3.96□□□□□ -1.78
SNX4-202ENST00000465505 MAP3K20Q9NYL2 800 aaKnown RBP3.96□□□□□ -1.78
SNX4-202ENST00000465505 RNF181Q9P0P0 153 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 SCOCQ9UIL1 159 aa3.96□□□□□ -1.78
SNX4-202ENST00000465505 FOSP01100 380 aaPredicted RBP3.95□□□□□ -1.78
SNX4-202ENST00000465505 ITGAMP11215 1152 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 ZNF37AP17032 561 aaPredicted RBP3.95□□□□□ -1.78
SNX4-202ENST00000465505 LMO1P25800 156 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 TDO2P48775 406 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 MRPS9P82933 396 aaKnown RBP3.95□□□□□ -1.78
SNX4-202ENST00000465505 SP140Q13342 867 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 MPP3Q13368 585 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 BIRC2Q13490 618 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 ADRM1Q16186 407 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 CCDC184Q52MB2 194 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 HDGFL2Q7Z4V5 671 aaPredicted RBP3.95□□□□□ -1.78
SNX4-202ENST00000465505 RNF180Q86T96 592 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 CREBRFQ8IUR6 639 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 CCDC146Q8IYE0 955 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 C1orf131Q8NDD1 294 aaKnown RBP3.95□□□□□ -1.78
SNX4-202ENST00000465505 FBXO18Q8NFZ0 1043 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 LMBR1Q8WVP7 490 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 SLC9A6Q92581 669 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 RPS6KC1Q96S38 1066 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 ORAI2Q96SN7 254 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 TTC1Q99614 292 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 RETREG1Q9H6L5 497 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 CWC25Q9NXE8 425 aaPredicted RBP3.95□□□□□ -1.78
SNX4-202ENST00000465505 FAM30AQ9NZY2 134 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 GABBR1Q9UBS5 961 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 SMC3Q9UQE7 1217 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 WASHC2CQ9Y4E1 1318 aa3.95□□□□□ -1.78
SNX4-202ENST00000465505 A0A1B0GTW7 788 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 CCDC189A1A4V9 331 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 ENPP3O14638 875 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 COQ9O75208 318 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 IBSPP21815 317 aaPredicted RBP3.94□□□□□ -1.78
SNX4-202ENST00000465505 SREBF1P36956 1147 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 TBX4P57082 545 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 CCT2P78371 535 aaKnown RBP3.94□□□□□ -1.78
SNX4-202ENST00000465505 MXRA7P84157 204 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms