RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
APTX-213ENST00000465003 CYP24A1Q07973 514 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 HSP90AA2PQ14568 343 aaPredicted RBP12.87□□□□□ -0.35
APTX-213ENST00000465003 UPP1Q16831 310 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 TMEM265A0A087WTH1 108 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 FOSL2P15408 326 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 TNNI1P19237 187 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 CCNE1P24864 410 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 PAK1Q13153 545 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 STIM1Q13586 685 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 ZBTB6Q15916 424 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 CD300LGQ6UXG3 332 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 C11orf57Q6ZUT1 292 aaPredicted RBP12.87□□□□□ -0.35
APTX-213ENST00000465003 ADGRD2Q7Z7M1 963 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 RBM23Q86U06 439 aaKnown RBP12.87□□□□□ -0.35
APTX-213ENST00000465003 CEP57Q86XR8 500 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 GLYCTKQ8IVS8 523 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 C12orf56Q8IXR9 622 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 VPS52Q8N1B4 723 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 DUSP9Q99956 384 aaKnown RBP12.87□□□□□ -0.35
APTX-213ENST00000465003 PLEKHA5Q9HAU0 1116 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 ADAM28Q9UKQ2 775 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 RWDD3Q9Y3V2 267 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 VWA8A3KMH1 1905 aa12.87□□□□□ -0.35
APTX-213ENST00000465003 LRRIQ3A6PVS8 624 aaPredicted RBP12.86□□□□□ -0.35
APTX-213ENST00000465003 HIDE1A8MVS5 230 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 PER2O15055 1255 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 TADA2AO75478 443 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 ITGB3P05106 788 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 KRT19P08727 400 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 RBM10P98175 930 aaKnown RBP12.86□□□□□ -0.35
APTX-213ENST00000465003 KYAT1Q16773 422 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 KLHL40Q2TBA0 621 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 RBM43Q6ZSC3 357 aaKnown RBP12.86□□□□□ -0.35
APTX-213ENST00000465003 CREBRFQ8IUR6 639 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 C1orf127Q8N9H9 656 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 TRIML1Q8N9V2 468 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 GOLGA5Q8TBA6 731 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 TCF25Q9BQ70 676 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 TMEM175Q9BSA9 504 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 PLVAPQ9BX97 442 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 ENTPD7Q9NQZ7 604 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 DPP3Q9NY33 737 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 UBQLN1Q9UMX0 589 aaKnown RBP12.86□□□□□ -0.35
APTX-213ENST00000465003 FRMD4BQ9Y2L6 1034 aa12.86□□□□□ -0.35
APTX-213ENST00000465003 A0A0C4DFX4 3053 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 SYCE3A1L190 88 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 SPTLC1O15269 473 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 TMEM191BP0C7N4 346 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 POLR2BP30876 1174 aaKnown RBP12.85□□□□□ -0.35
APTX-213ENST00000465003 NLRP12P59046 1061 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 COBLL1Q53SF7 1204 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 SPATA1Q5VX52 437 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 FUT10Q6P4F1 479 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 FAM186BQ8IYM0 893 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 DHTKD1Q96HY7 919 aaPredicted RBP12.85□□□□□ -0.35
APTX-213ENST00000465003 SAMD11Q96NU1 681 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 FNBP1Q96RU3 617 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 GAS2L1Q99501 681 aaPredicted RBP12.85□□□□□ -0.35
APTX-213ENST00000465003 TSG101Q99816 390 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 ASB7Q9H672 318 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 TLR9Q9NR96 1032 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 SLC38A7Q9NVC3 462 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 TIMM13Q9Y5L4 95 aaPredicted RBP12.85□□□□□ -0.35
APTX-213ENST00000465003 MTCH2Q9Y6C9 303 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 LRRN2O75325 713 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 IL18RAPO95256 599 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 RB1P06400 928 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 RPL17P18621 184 aaKnown RBP12.85□□□□□ -0.35
APTX-213ENST00000465003 TKTP29401 623 aaKnown RBP12.85□□□□□ -0.35
APTX-213ENST00000465003 PPM1AP35813 382 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 PSMD6Q15008 389 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 EDRF1Q3B7T1 1238 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 DCAF17Q5H9S7 520 aaPredicted RBP12.85□□□□□ -0.35
APTX-213ENST00000465003 GPR153Q6NV75 609 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 PRSS55Q6UWB4 352 aaPredicted RBP12.85□□□□□ -0.35
APTX-213ENST00000465003 TMC7Q7Z402 723 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 SLC9A9Q8IVB4 645 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 CSGALNACT2Q8N6G5 542 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 BEST2Q8NFU1 509 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 DNAJC25Q9H1X3 360 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 CGNQ9P2M7 1197 aaKnown RBP12.85□□□□□ -0.35
APTX-213ENST00000465003 SIX4Q9UIU6 781 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 C2CD2Q9Y426 696 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 NUB1Q9Y5A7 615 aa12.85□□□□□ -0.35
APTX-213ENST00000465003 KIAA0391O15091 583 aaKnown RBP12.84□□□□□ -0.35
APTX-213ENST00000465003 CLSTN1O94985 981 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 SNRPFP62306 86 aaKnown RBP12.84□□□□□ -0.35
APTX-213ENST00000465003 PLCB3Q01970 1234 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 KRT17Q04695 432 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 TIGD5Q53EQ6 642 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 RTP2Q5QGT7 225 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 C1orf220Q5T0J3 134 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 FAM171A1Q5VUB5 890 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 C9orf57Q5W0N0 161 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms