RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 RFX1P22670 979 aa12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 CHRNDQ07001 517 aa12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 UBE4AQ14139 1066 aa12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 CTTNQ14247 550 aaKnown RBP12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 CAVIN4Q5BKX8 364 aa12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 HS2ST1Q7LGA3 356 aa12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 CCNJLQ8IV13 435 aa12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 SRRM1Q8IYB3 904 aaKnown RBP12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.24□□□□□ -0.452e-6■■□□□ 12
TNRC6A-205ENST00000464539 MAML1Q92585 1016 aa12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 NSL1Q96IY1 281 aa12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 TRAIPQ9BWF2 469 aa12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 TMOD4Q9NZQ9 345 aa12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 UMODL1Q5DID0 1318 aa12.24□□□□□ -0.45
TNRC6A-205ENST00000464539 POTEMA6NI47 508 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 RASA4BC9J798 803 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 ANKRD63C9JTQ0 380 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 SMAPO00193 183 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 HGSO14964 777 aaPredicted RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 RASA4O43374 803 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 RAD17O75943 681 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 PABPC4LP0CB38 370 aaKnown RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 TROVE2P10155 538 aaKnown RBP eCLIP12.23□□□□□ -0.452e-14■■■■□ 25.1
TNRC6A-205ENST00000464539 PIM1P11309 404 aaPredicted RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 DESP17661 470 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 CYP11B2P19099 503 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 ABCB4P21439 1286 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 CDK7P50613 346 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 GPC5P78333 572 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 ITGA9Q13797 1035 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 PTK6Q13882 451 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 KIF22Q14807 665 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 SIX1Q15475 284 aaPredicted RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 DBN1Q16643 649 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 NFIL3Q16649 462 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 BMT2Q1RMZ1 405 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 CTC1Q2NKJ3 1217 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 ARMC3Q5W041 872 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 NLRP9Q7RTR0 991 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 CLNKQ7Z7G1 428 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 SLC51AQ86UW1 340 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 MICALL2Q8IY33 904 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 ZDHHC14Q8IZN3 488 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 ST13P4Q8IZP2 240 aaPredicted RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 CYP4X1Q8N118 509 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 SLC35C1Q96A29 364 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 NSUN4Q96CB9 384 aaKnown RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 ARHGEF26Q96DR7 871 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 FGFBP2Q9BYJ0 223 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 THAP2Q9H0W7 228 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 EPB41L1Q9H4G0 881 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 GALNT8Q9NY28 637 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 NINJ2Q9NZG7 142 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 TBC1D7Q9P0N9 293 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 BIN2Q9UBW5 565 aaPredicted RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 COG5Q9UP83 839 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 IGSF9BQ9UPX0 1349 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 SMIM31A0A1B0GVY4 71 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 BTBD19C9JJ37 291 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 FSCN2O14926 492 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 SLC37A4O43826 429 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 DNAJC6O75061 913 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 TBX10O75333 385 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 CBX6O95503 412 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 GAS8O95995 478 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 TPP2P29144 1249 aaPredicted RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 RPL26P61254 145 aaKnown RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 USP4Q13107 963 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 DNAJC3Q13217 504 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 MTA1Q13330 715 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 DRAP1Q14919 205 aaPredicted RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 KRT72Q14CN4 511 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 RASA2Q15283 850 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 ECM1Q16610 540 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 KYNUQ16719 465 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 WDR72Q3MJ13 1102 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 ACSBG2Q5FVE4 666 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 C12orf60Q5U649 245 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 CCDC174Q6PII3 467 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 DPP8Q6V1X1 898 aaPredicted RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 GPBP1Q86WP2 473 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 PIP4K2CQ8TBX8 421 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 CD101Q93033 1021 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 PPP2R3CQ969Q6 453 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 DCPSQ96C86 337 aaKnown RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 HIC2Q96JB3 615 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 TTC25Q96NG3 672 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 SSU72Q9NP77 194 aaKnown RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 DNAJC12Q9UKB3 198 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 AJAP1Q9UKB5 411 aaPredicted RBP12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 A0A1B0GUL6 1792 aa12.23□□□□□ -0.45
TNRC6A-205ENST00000464539 LAMB1P07942 1786 aa12.22□□□□□ -0.45
TNRC6A-205ENST00000464539 TP73O15350 636 aa12.22□□□□□ -0.45
TNRC6A-205ENST00000464539 GYG2O15488 501 aa12.22□□□□□ -0.45
TNRC6A-205ENST00000464539 ATP9BO43861 1147 aa12.22□□□□□ -0.45
TNRC6A-205ENST00000464539 TMCC1O94876 653 aa12.22□□□□□ -0.45
TNRC6A-205ENST00000464539 FAM200BP0CF97 657 aa12.22□□□□□ -0.45
TNRC6A-205ENST00000464539 RAP1GDS1P52306 607 aa12.22□□□□□ -0.45
TNRC6A-205ENST00000464539 SESN3P58005 492 aa12.22□□□□□ -0.45
TNRC6A-205ENST00000464539 DCAF17Q5H9S7 520 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms