RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ADGRD2Q7Z7M1 963 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 RBM23Q86U06 439 aaKnown RBP15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 NT5DC4Q86YG4 428 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 CBWD2Q8IUF1 395 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 SMYD4Q8IYR2 804 aaPredicted RBP15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 RNF168Q8IYW5 571 aaPredicted RBP15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 RDH13Q8NBN7 331 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 BEST2Q8NFU1 509 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 TMEM174Q8WUU8 243 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 HERC2P3Q9BVR0 1158 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 IGFLR1Q9H665 355 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 MAN1B1Q9UKM7 699 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 IRAK3Q9Y616 596 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 XIRP2A4UGR9 3374 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 C2orf71A6NGG8 1288 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 PER2O15055 1255 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 TRAPPC3O43617 180 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 NCK2O43639 380 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 EXOC3O60645 756 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 PRCPP42785 496 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 NRIP1P48552 1158 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 GUCY2FP51841 1108 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 WNT7BP56706 349 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 HYAL1Q12794 435 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 ELAVL2Q12926 359 aaKnown RBP15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 SNRNP35Q16560 246 aaKnown RBP15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 USP41Q3LFD5 358 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 COBLL1Q53SF7 1204 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 ISM2Q6H9L7 571 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 KIAA1841Q6NSI8 718 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 SLC9A9Q8IVB4 645 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 C3orf58Q8NDZ4 430 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 AUTS2Q8WXX7 1259 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 PDE11AQ9HCR9 933 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 MRPL17Q9NRX2 175 aaKnown RBP15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 CHST7Q9NS84 486 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 DMAC2Q9NW81 257 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 TRAF3IP3Q9Y228 551 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 SSX2IPQ9Y2D8 614 aa15.73■□□□□ 0.11
SQSTM1-205ENST00000464493 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 LILRB3O75022 631 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 NR3C1P04150 777 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 URODP06132 367 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 GTF2F1P35269 517 aaKnown RBP eCLIP15.72■□□□□ 0.119e-8■■■■■ 28.6
SQSTM1-205ENST00000464493 GLUD2P49448 558 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 DSG1Q02413 1049 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 MYBPC2Q14324 1141 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 SURF1Q15526 300 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 PTPN14Q15678 1187 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 FAM171A1Q5VUB5 890 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 KIAA0319Q5VV43 1072 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 EFCAB13Q8IY85 973 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 TMEM130Q8N3G9 435 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 CACTINQ8WUQ7 758 aaKnown RBP15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 B3GALT6Q96L58 329 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 CDCA3Q99618 268 aaPredicted RBP15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 DPP3Q9NY33 737 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 KIAA1468Q9P260 1216 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 NUB1Q9Y5A7 615 aa15.72■□□□□ 0.11
SQSTM1-205ENST00000464493 C2CD2LO14523 706 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 BRCC3P46736 316 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 TFAMQ00059 246 aaKnown RBP15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 NFIL3Q16649 462 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 DUSP6Q16828 381 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 C9orf57Q5W0N0 161 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 CEP57Q86XR8 500 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 GPR65Q8IYL9 337 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 HLA-CQ95604 372 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 PABPC5Q96DU9 382 aaKnown RBP15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 MFSD14AQ96MC6 490 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 TTPALQ9BTX7 342 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 EMILIN2Q9BXX0 1053 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 CLSTN2Q9H4D0 955 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 PRDM6Q9NQX0 595 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 COG5Q9UP83 839 aa15.71■□□□□ 0.11
SQSTM1-205ENST00000464493 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 FSD2A1L4K1 749 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 I3L4J1 428 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 BIN1O00499 593 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 PIRO00625 290 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 CLASP2O75122 1294 aaKnown RBP15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 RPL13P26373 211 aaKnown RBP15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 MCM4P33991 863 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 CYP24A1Q07973 514 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 ADAM9Q13443 819 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 ADAM15Q13444 863 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 STIM1Q13586 685 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 MORC3Q14149 939 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 COL19A1Q14993 1142 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 PSMD6Q15008 389 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 CTC1Q2NKJ3 1217 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 RTP2Q5QGT7 225 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 CENPPQ6IPU0 288 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 EP400NLQ6ZTU2 488 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 ADSSL1Q8N142 457 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 EFHBQ8N7U6 833 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 RIN2Q8WYP3 895 aaPredicted RBP15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 CCDC127Q96BQ5 260 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 KLHL5Q96PQ7 755 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms