RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 NDST4Q9H3R1 872 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 NRDE2Q9H7Z3 1164 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 TMEM8AQ9HCN3 771 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 ANO9A1A5B4 782 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 FSD2A1L4K1 749 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 STX10O60499 249 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 VNN1O95497 513 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 CST3P01034 146 aaPredicted RBP15□□□□□ -0.01
PHACTR4-203ENST00000463428 AFPP02771 609 aaKnown RBP15□□□□□ -0.01
PHACTR4-203ENST00000463428 PRKCSHP14314 528 aaPredicted RBP15□□□□□ -0.01
PHACTR4-203ENST00000463428 LRPAP1P30533 357 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 UVSSAQ2YD98 709 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 FAM109BQ6ICB4 259 aaPredicted RBP15□□□□□ -0.01
PHACTR4-203ENST00000463428 COLGALT2Q8IYK4 626 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 BEST2Q8NFU1 509 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 SP7Q8TDD2 431 aaPredicted RBP15□□□□□ -0.01
PHACTR4-203ENST00000463428 ANKRD36BP1Q96IX9 119 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 NAP1L5Q96NT1 182 aaPredicted RBP15□□□□□ -0.01
PHACTR4-203ENST00000463428 RAD9AQ99638 391 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 MRPL9Q9BYD2 267 aaKnown RBP15□□□□□ -0.01
PHACTR4-203ENST00000463428 CWH43Q9H720 699 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 GOLGA2P5Q9HBQ8 144 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 SLC38A7Q9NVC3 462 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 DPP3Q9NY33 737 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 HCSTQ9UBK5 93 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 SIX4Q9UIU6 781 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 COQ4Q9Y3A0 265 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 A0A1B0GTH6 734 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 TULP1O00294 542 aaPredicted RBP15□□□□□ -0.01
PHACTR4-203ENST00000463428 XPOTO43592 962 aaKnown RBP15□□□□□ -0.01
PHACTR4-203ENST00000463428 TNNC2P02585 160 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 TMEM191BP0C7N4 346 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 MXI1P50539 228 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 TUSC3Q13454 348 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 PAN2Q504Q3 1202 aaKnown RBP15□□□□□ -0.01
PHACTR4-203ENST00000463428 KRT39Q6A163 491 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 ANKRD20A12PQ8NF67 263 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 PAAF1Q9BRP4 392 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 MMRN2Q9H8L6 949 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 RTN4Q9NQC3 1192 aaKnown RBP15□□□□□ -0.01
PHACTR4-203ENST00000463428 CACNG4Q9UBN1 327 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 DNAJB4Q9UDY4 337 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 INSL6Q9Y581 213 aa15□□□□□ -0.01
PHACTR4-203ENST00000463428 KIAA1671Q9BY89 1806 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 LGALS16A8MUM7 142 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 GRXCR1A8MXD5 290 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 PIRO00625 290 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 PPEF2O14830 753 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 P4HA2O15460 535 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 LRRN2O75325 713 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 ITGB3P05106 788 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 LINC00271P0C7V0 271 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 IGFBP6P24592 240 aaPredicted RBP14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 NR1I3Q14994 352 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 EPC2Q52LR7 807 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 C9orf57Q5W0N0 161 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 CD300LGQ6UXG3 332 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 LRRC43Q8N309 656 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 LMO3Q8TAP4 145 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 TAS1R2Q8TE23 839 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 SEMA4DQ92854 862 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 YME1L1Q96TA2 773 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 ITGA11Q9UKX5 1188 aa14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.99□□□□□ -0.01
PHACTR4-203ENST00000463428 GTPBP10A4D1E9 387 aaKnown RBP14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 TEX33O43247 280 aa14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 N4BP1O75113 896 aaKnown RBP14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 HLA-DRAP01903 254 aa14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 RPL9P32969 192 aaKnown RBP14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 CLCNKBP51801 687 aa14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 RABGGTBP53611 331 aa14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 RNASELQ05823 741 aaKnown RBP14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 KCNMA1Q12791 1236 aa14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 BTG3Q14201 252 aaPredicted RBP14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 UPP1Q16831 310 aa14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 SARM1Q6SZW1 724 aa14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 ZBED2Q9BTP6 218 aa14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 MRPL42Q9Y6G3 142 aaKnown RBP14.98□□□□□ -0.01
PHACTR4-203ENST00000463428 LCHNA4D1U4 455 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 CASTOR2A6NHX0 329 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 TLL1O43897 1013 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 SERPINC1P01008 464 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 GALTP07902 379 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 POLR2BP30876 1174 aaKnown RBP14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 SLC11A1P49279 550 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 UBASH3AP57075 661 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 MYL7Q01449 175 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 BIRC3Q13489 604 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 NCOA4Q13772 614 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 DPY19L2P1Q6NXN4 242 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 CHRDL2Q6WN34 429 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 TDHQ8IZJ6 230 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 FBXL13Q8NEE6 735 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 RABGGTAQ92696 567 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 DDX27Q96GQ7 796 aaKnown RBP14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 UROC1Q96N76 676 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 TMEM175Q9BSA9 504 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 XYLT2Q9H1B5 865 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 RAB20Q9NX57 234 aa14.97□□□□□ -0.01
PHACTR4-203ENST00000463428 IFNKQ9P0W0 207 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms