RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 AKR1B10O60218 316 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 HNRNPCL1O60812 293 aaKnown RBP12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 PEX11AO75192 247 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 UNC5CO95185 931 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 EYA4O95677 639 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 CYP3A4P08684 503 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 RARBP10826 455 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 USP11P51784 963 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 MRPS9P82933 396 aaKnown RBP12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 NR5A1Q13285 461 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 NAB2Q15742 525 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 COBLL1Q53SF7 1204 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 TNFAIP8L3Q5GJ75 292 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 TRIM68Q6AZZ1 485 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 TAPT1Q6NXT6 567 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 SMYD4Q8IYR2 804 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 TBCKQ8TEA7 893 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 TAF4BQ92750 862 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 ABHD8Q96I13 439 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 GBP5Q96PP8 586 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 WDR11Q9BZH6 1224 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 DAAM1Q9Y4D1 1078 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 ZSCAN5CA6NGD5 496 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 TGFB3P10600 412 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 CXCR5P32302 372 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 VHLP40337 213 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 PRCPP42785 496 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 TUBP50607 506 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 TNFAIP2Q03169 654 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 LSAMPQ13449 338 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 Q4G0T1 1027 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 CEP55Q53EZ4 464 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 PIK3AP1Q6ZUJ8 805 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 USP49Q70CQ1 688 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 PPP2R3CQ969Q6 453 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 GPRASP2Q96D09 838 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 NAP1L4Q99733 375 aaKnown RBP12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 ADAM7Q9H2U9 754 aa12.25□□□□□ -0.45
TRAPPC3-205ENST00000462715 NKRFO15226 690 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 ECEL1O95672 775 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 GJB1P08034 283 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 GSTT1P30711 240 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 EIF4A3P38919 411 aaKnown RBP12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 RFC5P40937 340 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 ADCYAP1R1P41586 468 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 RASSF2P50749 326 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 SULT2A1Q06520 285 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 C10orf76Q5T2E6 689 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 NIPA1Q7RTP0 329 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 SMYD1Q8NB12 490 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 CRYGNQ8WXF5 182 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 TNFRSF25Q93038 417 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 MS4A14Q96JA4 679 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 RMDN2Q96LZ7 410 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 DEFB118Q96PH6 123 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 NAP1L3Q99457 506 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 PDGFCQ9NRA1 345 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 UBIAD1Q9Y5Z9 338 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 MYH10P35580 1976 aa12.24□□□□□ -0.45
TRAPPC3-205ENST00000462715 A0A1B0GVG6 124 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 TMEM221A6NGB7 291 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 DUSP11O75319 330 aaKnown RBP12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 TXNP10599 105 aaKnown RBP12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 ICAM3P32942 547 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 PSMD7P51665 324 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 MTMR1Q13613 665 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 INF2Q27J81 1249 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 DUSP28Q4G0W2 176 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 NEK8Q86SG6 692 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 OR2W6PQ8NHA6 318 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 OLFM3Q96PB7 478 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 SMC6Q96SB8 1091 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 MXRA8Q9BRK3 442 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 SPC25Q9HBM1 224 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 EHD2Q9NZN4 543 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 G3BP2Q9UN86 482 aaKnown RBP12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 USP20Q9Y2K6 914 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 KIAA1217Q5T5P2 1943 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 WNT7AO00755 349 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 NVLO15381 856 aaKnown RBP12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 NCK2O43639 380 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 ATP6V1G1O75348 118 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 E2F6O75461 281 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 CIITAP33076 1130 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 CLUL1Q15846 466 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 TTI2Q6NXR4 508 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 UNC13DQ70J99 1090 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 SYCP3Q8IZU3 236 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 GATA6Q92908 595 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 EPSTI1Q96J88 318 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 AGAP3Q96P47 875 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 SMARCAL1Q9NZC9 954 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 NDUFA13Q9P0J0 144 aa12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.23□□□□□ -0.45
TRAPPC3-205ENST00000462715 SPATA31C2B4DYI2 1134 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 TRAFD1O14545 582 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 RGS20O76081 388 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 FAM200BP0CF97 657 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 ITGB5P18084 799 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 INHBCP55103 352 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms