RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 SLC39A11Q8N1S5 342 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 ENOX1Q8TC92 643 aaKnown RBP12.21□□□□□ -0.45
SSBP1-202ENST00000461433 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 ZNF558Q96NG5 402 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 CGRRF1Q99675 332 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 ZNF576Q9H609 170 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 CERS4Q9HA82 394 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 INTS13Q9NVM9 706 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 MTUS1Q9ULD2 1270 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 SCN1AP35498 2009 aa12.21□□□□□ -0.46
SSBP1-202ENST00000461433 ANO9A1A5B4 782 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 PPEF2O14830 753 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 ITGB1P05556 798 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 EPB41P11171 864 aaKnown RBP12.2□□□□□ -0.46
SSBP1-202ENST00000461433 CTNNB1P35222 781 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 OR1G1P47890 313 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 ALDH7A1P49419 539 aaKnown RBP12.2□□□□□ -0.46
SSBP1-202ENST00000461433 VAMP7P51809 220 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 MARSP56192 900 aaKnown RBP12.2□□□□□ -0.46
SSBP1-202ENST00000461433 TFAMQ00059 246 aaKnown RBP12.2□□□□□ -0.46
SSBP1-202ENST00000461433 ENPEPQ07075 957 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 BFSP1Q12934 665 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 INTS8Q75QN2 995 aaKnown RBP12.2□□□□□ -0.46
SSBP1-202ENST00000461433 FRMD5Q7Z6J6 570 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 C1orf127Q8N9H9 656 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 KLHL23Q8NBE8 558 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 C3orf58Q8NDZ4 430 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 UROC1Q96N76 676 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 SAMD11Q96NU1 681 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 PLVAPQ9BX97 442 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 VN1R3Q9BXE9 311 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 MTMR12Q9C0I1 747 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 AAASQ9NRG9 546 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 DPP3Q9NY33 737 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 FAN1Q9Y2M0 1017 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 RWDD3Q9Y3V2 267 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 PCDHB12Q9Y5F1 795 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 COL4A4P53420 1690 aaPredicted RBP12.2□□□□□ -0.46
SSBP1-202ENST00000461433 ATG2AQ2TAZ0 1938 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 CDH23Q9H251 3354 aa12.2□□□□□ -0.46
SSBP1-202ENST00000461433 TMEM265A0A087WTH1 108 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 PIRO00625 290 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 IKBKBO14920 756 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 KIF4AO95239 1232 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 C4BPAP04003 597 aaKnown RBP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 RB1P06400 928 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 TRIM49P0CI25 452 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 TRIM49CP0CI26 452 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 RPL9P32969 192 aaKnown RBP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 PPP3CAQ08209 521 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 NCAPHQ15003 741 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 DUOXA2Q1HG44 320 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 C9orf57Q5W0N0 161 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 C15orf39Q6ZRI6 1047 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 BEST2Q8NFU1 509 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 CACTINQ8WUQ7 758 aaKnown RBP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 IGSF21Q96ID5 467 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 FNBP1Q96RU3 617 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 BPIFA3Q9BQP9 254 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 HSD3B7Q9H2F3 369 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 SAMSN1Q9NSI8 373 aaKnown RBP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 SPG21Q9NZD8 308 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 SIX4Q9UIU6 781 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 PRG3Q9Y2Y8 225 aaPredicted RBP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 SZT2Q5T011 3432 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 TRANK1O15050 2925 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 H3BNC9 293 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 TMEM189-UBE2V1I3L0A0 370 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 RFXAPO00287 272 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 TULP1O00294 542 aaPredicted RBP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 PODXLO00592 558 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 XPOTO43592 962 aaKnown RBP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 LPXNO60711 386 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 FGF18O76093 207 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 TNNI1P19237 187 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 DNAJB1P25685 340 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 FXR1P51114 621 aaKnown RBP eCLIP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 PLCB3Q01970 1234 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 GPR153Q6NV75 609 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 DCLRE1AQ6PJP8 1040 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 TRAPPC11Q7Z392 1133 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 RNF168Q8IYW5 571 aaPredicted RBP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 FBXO22Q8NEZ5 403 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 SPPL3Q8TCT6 385 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 ARNTL2Q8WYA1 636 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 SLC35C1Q96A29 364 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 COLEC11Q9BWP8 271 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 THAP9Q9H5L6 903 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 ARMCX3Q9UH62 379 aaPredicted RBP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 NFE2L3Q9Y4A8 694 aa12.19□□□□□ -0.46
SSBP1-202ENST00000461433 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.19□□□□□ -0.46
SSBP1-202ENST00000461433 VWA8A3KMH1 1905 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 B3GAT3O94766 335 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 FGFR1OPO95684 399 aaKnown RBP12.18□□□□□ -0.46
SSBP1-202ENST00000461433 GNA14O95837 355 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 CST3P01034 146 aaPredicted RBP12.18□□□□□ -0.46
SSBP1-202ENST00000461433 ITGB3P05106 788 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 TMEM191BP0C7N4 346 aa12.18□□□□□ -0.46
SSBP1-202ENST00000461433 KRT13P13646 458 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms