RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 GNAI2P04899 355 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 PARP1P09874 1014 aaKnown RBP3.86□□□□□ -1.79
VCL-203ENST00000461383 TNFSF4P23510 183 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 PRDX5P30044 214 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 STT3AP46977 705 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 TM4SF4P48230 202 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 PIK3CGP48736 1102 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 FLT3LGP49771 235 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 MAPK10P53779 464 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 SUMO3P55854 103 aaPredicted RBP3.86□□□□□ -1.79
VCL-203ENST00000461383 SOX8P57073 446 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 ATP8B2P98198 1209 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 CAP1Q01518 475 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 DLX2Q07687 328 aaPredicted RBP3.86□□□□□ -1.79
VCL-203ENST00000461383 KIAA2012Q0VF49 1180 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 GRM1Q13255 1194 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 PABPC1LQ4VXU2 614 aaKnown RBP3.86□□□□□ -1.79
VCL-203ENST00000461383 SLC44A4Q53GD3 710 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 HSP90AB4PQ58FF6 505 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 FAM47AQ5JRC9 791 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 BORAQ6PGQ7 559 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 ZNF783Q6ZMS7 281 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 PPP1R3BQ86XI6 285 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 PLXDC1Q8IUK5 500 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 LIX1LQ8IVB5 337 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 TMEM151BQ8IW70 566 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 KBTBD2Q8IY47 623 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 OR2C3Q8N628 320 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 LILRA3Q8N6C8 439 aaPredicted RBP3.86□□□□□ -1.79
VCL-203ENST00000461383 DEPTORQ8TB45 409 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 ANKS1AQ92625 1134 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 RABGGTAQ92696 567 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 SGCZQ96LD1 299 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 C1orf43Q9BWL3 253 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 IL23AQ9NPF7 189 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 STARD7Q9NQZ5 370 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 SACM1LQ9NTJ5 587 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.86□□□□□ -1.79
VCL-203ENST00000461383 FNIP2Q9P278 1114 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 USP19O94966 1318 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 ZMYM3Q14202 1370 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 A0A0G2JLL6 359 aaPredicted RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 UBE2QL1A1L167 161 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 NT5C1B-RDH14C9J2C7 533 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 FFAR3O14843 346 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 NPHP1O15259 732 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 SLC26A4O43511 780 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 TBC1D4O60343 1298 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 IL18RAPO95256 599 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 SNRPA1P09661 255 aaKnown RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 ALAS1P13196 640 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 ALOX15P16050 662 aaPredicted RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 NPR1P16066 1061 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 PHKA1P46020 1223 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 RAC3P60763 192 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 RAP2BP61225 183 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 NOMO3P69849 1222 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 FMO1Q01740 532 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 EXOSC9Q06265 439 aaKnown RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 TRIM14Q14142 442 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 HABP2Q14520 560 aaPredicted RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 TBR1Q16650 682 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 RNF151Q2KHN1 245 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 VMACQ2NL98 169 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 FAM209BQ5JX69 171 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 FAM83BQ5T0W9 1011 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 ZNF529Q6P280 563 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 PLEKHH3Q7Z736 793 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 ZNF761Q86XN6 746 aaPredicted RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 CELF5Q8N6W0 485 aaKnown RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 SHCBP1Q8NEM2 672 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 NLGN4YQ8NFZ3 816 aaPredicted RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 OR6B3Q8NGW1 331 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 POF1BQ8WVV4 589 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 TRIM63Q969Q1 353 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 GPHA2Q96T91 129 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 P2RX7Q99572 595 aaKnown RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 TCF25Q9BQ70 676 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 MRI1Q9BV20 369 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 UNKQ9C0B0 810 aaKnown RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 MRPL46Q9H2W6 279 aaKnown RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 BRD9Q9H8M2 597 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 RSAD1Q9HA92 442 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 SIDT1Q9NXL6 827 aaKnown RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 GPRC5BQ9NZH0 403 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 CFAP97Q9P2B7 532 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 CPNE7Q9UBL6 633 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 SRRDQ9UH36 339 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 AFF4Q9UHB7 1163 aaKnown RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 ZDHHC8Q9ULC8 765 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 PADI4Q9UM07 663 aa3.85□□□□□ -1.79
VCL-203ENST00000461383 MAGED2Q9UNF1 606 aaPredicted RBP3.85□□□□□ -1.79
VCL-203ENST00000461383 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.85□□□□□ -1.79
VCL-203ENST00000461383 TCRBV7S2A1N4TA0A589 114 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 B5MCH6 92 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 MYO1CO00159 1063 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 APOL1O14791 398 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 TBX3O15119 743 aa3.84□□□□□ -1.79
VCL-203ENST00000461383 CDC14BO60729 498 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms