RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 C2CD2Q9Y426 696 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 LACTBL1A8MY62 500 aa12.02□□□□□ -0.49
APTX-209ENST00000460940 TMEM189-UBE2V1I3L0A0 370 aa12.02□□□□□ -0.49
APTX-209ENST00000460940 CALUO43852 315 aaPredicted RBP12.02□□□□□ -0.49
APTX-209ENST00000460940 RPL9P32969 192 aaKnown RBP12.02□□□□□ -0.49
APTX-209ENST00000460940 MYBPC2Q14324 1141 aa12.02□□□□□ -0.49
APTX-209ENST00000460940 BMS1Q14692 1282 aaKnown RBP12.02□□□□□ -0.49
APTX-209ENST00000460940 TERF2Q15554 542 aa12.02□□□□□ -0.49
APTX-209ENST00000460940 CRELD2Q6UXH1 353 aaPredicted RBP12.02□□□□□ -0.49
APTX-209ENST00000460940 DDX53Q86TM3 631 aaKnown RBP12.02□□□□□ -0.49
APTX-209ENST00000460940 TMEM173Q86WV6 379 aaPredicted RBP12.02□□□□□ -0.49
APTX-209ENST00000460940 SLC9A9Q8IVB4 645 aa12.02□□□□□ -0.49
APTX-209ENST00000460940 XXYLT1Q8NBI6 393 aa12.02□□□□□ -0.49
APTX-209ENST00000460940 RNF214Q8ND24 703 aa12.02□□□□□ -0.49
APTX-209ENST00000460940 KIF12Q96FN5 646 aa12.02□□□□□ -0.49
APTX-209ENST00000460940 ZMAT2Q96NC0 199 aaKnown RBP12.02□□□□□ -0.49
APTX-209ENST00000460940 CXCL16Q9H2A7 254 aa12.02□□□□□ -0.49
APTX-209ENST00000460940 MARCH5Q9NX47 278 aa12.02□□□□□ -0.49
APTX-209ENST00000460940 RBAKQ9NYW8 714 aaPredicted RBP12.02□□□□□ -0.49
APTX-209ENST00000460940 UBQLN1Q9UMX0 589 aaKnown RBP12.02□□□□□ -0.49
APTX-209ENST00000460940 TRAF3IP3Q9Y228 551 aa12.02□□□□□ -0.49
APTX-209ENST00000460940 CASTOR2A6NHX0 329 aa12.01□□□□□ -0.49
APTX-209ENST00000460940 ZNF233A6NK53 670 aa12.01□□□□□ -0.49
APTX-209ENST00000460940 NT5C1B-RDH14C9J2C7 533 aa12.01□□□□□ -0.49
APTX-209ENST00000460940 STIM1Q13586 685 aa12.01□□□□□ -0.49
APTX-209ENST00000460940 TMEM132DQ14C87 1099 aa12.01□□□□□ -0.49
APTX-209ENST00000460940 NFIL3Q16649 462 aa12.01□□□□□ -0.49
APTX-209ENST00000460940 TRIML1Q8N9V2 468 aa12.01□□□□□ -0.49
APTX-209ENST00000460940 BCL7CQ8WUZ0 217 aaPredicted RBP12.01□□□□□ -0.49
APTX-209ENST00000460940 PPP2R3CQ969Q6 453 aa12.01□□□□□ -0.49
APTX-209ENST00000460940 PCIF1Q9H4Z3 704 aa12.01□□□□□ -0.49
APTX-209ENST00000460940 NGRNQ9NPE2 291 aaKnown RBP12.01□□□□□ -0.49
APTX-209ENST00000460940 MAN1B1Q9UKM7 699 aa12.01□□□□□ -0.49
APTX-209ENST00000460940 ADAM28Q9UKQ2 775 aa12.01□□□□□ -0.49
APTX-209ENST00000460940 SF3B1O75533 1304 aaKnown RBP eCLIP12.01□□□□□ -0.49
APTX-209ENST00000460940 FSCN2O14926 492 aa12□□□□□ -0.49
APTX-209ENST00000460940 DNAJB1P25685 340 aa12□□□□□ -0.49
APTX-209ENST00000460940 CYP2J2P51589 502 aa12□□□□□ -0.49
APTX-209ENST00000460940 ELAVL2Q12926 359 aaKnown RBP12□□□□□ -0.49
APTX-209ENST00000460940 SURF1Q15526 300 aa12□□□□□ -0.49
APTX-209ENST00000460940 ZBTB6Q15916 424 aa12□□□□□ -0.49
APTX-209ENST00000460940 SNRNP35Q16560 246 aaKnown RBP12□□□□□ -0.49
APTX-209ENST00000460940 UPP1Q16831 310 aa12□□□□□ -0.49
APTX-209ENST00000460940 JADE1Q6IE81 842 aa12□□□□□ -0.49
APTX-209ENST00000460940 DCLRE1AQ6PJP8 1040 aa12□□□□□ -0.49
APTX-209ENST00000460940 CNPY4Q8N129 248 aa12□□□□□ -0.49
APTX-209ENST00000460940 BEST2Q8NFU1 509 aa12□□□□□ -0.49
APTX-209ENST00000460940 ERCC4Q92889 916 aaPredicted RBP12□□□□□ -0.49
APTX-209ENST00000460940 FAM212AQ96EL1 285 aa12□□□□□ -0.49
APTX-209ENST00000460940 HERC2P3Q9BVR0 1158 aa12□□□□□ -0.49
APTX-209ENST00000460940 NUP62CLQ9H1M0 184 aa12□□□□□ -0.49
APTX-209ENST00000460940 NSUN3Q9H649 340 aaKnown RBP12□□□□□ -0.49
APTX-209ENST00000460940 KIAA1468Q9P260 1216 aa12□□□□□ -0.49
APTX-209ENST00000460940 PDCD11Q14690 1871 aaKnown RBP12□□□□□ -0.49
APTX-209ENST00000460940 PRRC2BQ5JSZ5 2229 aaKnown RBP12□□□□□ -0.49
APTX-209ENST00000460940 GOLGA8IPA6NC78 632 aa12□□□□□ -0.49
APTX-209ENST00000460940 GOLGA8JA6NMD2 632 aa12□□□□□ -0.49
APTX-209ENST00000460940 EXOC3O60645 756 aa12□□□□□ -0.49
APTX-209ENST00000460940 TADA2AO75478 443 aa12□□□□□ -0.49
APTX-209ENST00000460940 KIF4AO95239 1232 aa12□□□□□ -0.49
APTX-209ENST00000460940 EFEMP2O95967 443 aa12□□□□□ -0.49
APTX-209ENST00000460940 NR3C1P04150 777 aa12□□□□□ -0.49
APTX-209ENST00000460940 SOD2P04179 222 aa12□□□□□ -0.49
APTX-209ENST00000460940 LRPAP1P30533 357 aa12□□□□□ -0.49
APTX-209ENST00000460940 SOX4Q06945 474 aaPredicted RBP12□□□□□ -0.49
APTX-209ENST00000460940 CAMK1Q14012 370 aa12□□□□□ -0.49
APTX-209ENST00000460940 MORC3Q14149 939 aa12□□□□□ -0.49
APTX-209ENST00000460940 EDRF1Q3B7T1 1238 aa12□□□□□ -0.49
APTX-209ENST00000460940 ZCWPW2Q504Y3 356 aa12□□□□□ -0.49
APTX-209ENST00000460940 SPATA1Q5VX52 437 aa12□□□□□ -0.49
APTX-209ENST00000460940 SMYD4Q8IYR2 804 aaPredicted RBP12□□□□□ -0.49
APTX-209ENST00000460940 RNF168Q8IYW5 571 aaPredicted RBP12□□□□□ -0.49
APTX-209ENST00000460940 MAFAQ8NHW3 353 aaPredicted RBP12□□□□□ -0.49
APTX-209ENST00000460940 C18orf25Q96B23 403 aaPredicted RBP12□□□□□ -0.49
APTX-209ENST00000460940 TCF25Q9BQ70 676 aa12□□□□□ -0.49
APTX-209ENST00000460940 ZBP1Q9H171 429 aa12□□□□□ -0.49
APTX-209ENST00000460940 ENTPD7Q9NQZ7 604 aa12□□□□□ -0.49
APTX-209ENST00000460940 DMAC2Q9NW81 257 aa12□□□□□ -0.49
APTX-209ENST00000460940 TUBGCP4Q9UGJ1 667 aa12□□□□□ -0.49
APTX-209ENST00000460940 PLXNA4Q9HCM2 1894 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 PODXLO00592 558 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 PSMA7O14818 248 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 CLIC2O15247 247 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 TRAPPC3O43617 180 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 B3GAT3O94766 335 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 ADCY5O95622 1261 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 NFICP08651 508 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 CTSAP10619 480 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 PAX3P23760 479 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 RPL13P26373 211 aaKnown RBP11.99□□□□□ -0.49
APTX-209ENST00000460940 CLCNKBP51801 687 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 SMC1AQ14683 1233 aaKnown RBP11.99□□□□□ -0.49
APTX-209ENST00000460940 CAMK4Q16566 473 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 FUT10Q6P4F1 479 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 CBWD2Q8IUF1 395 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 GPR65Q8IYL9 337 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 ADSSL1Q8N142 457 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 KRT222Q8N1A0 295 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 VPS52Q8N1B4 723 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 ZSWIM2Q8NEG5 633 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms