RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 NRCAMQ92823 1304 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 A0A0B4J269 797 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 P4HA2O15460 535 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 DUSP11O75319 330 aaKnown RBP11.13□□□□□ -0.63
HERC4-207ENST00000460168 SMIM10L2AP0DMW4 78 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 SMIM10L2BP0DMW5 78 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 NLRP11P59045 1033 aaKnown RBP11.13□□□□□ -0.63
HERC4-207ENST00000460168 ARID5AQ03989 594 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 MFSD10Q14728 455 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 KRT72Q14CN4 511 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 KBTBD12Q3ZCT8 623 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 MARCH8Q5T0T0 291 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 NFRKBQ6P4R8 1299 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 REXO1L1PQ8IX06 675 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 CCDC170Q8IYT3 715 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 TRPV1Q8NER1 839 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 TMC2Q8TDI7 906 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 NLRP7Q8WX94 980 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 KAT2BQ92831 832 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 MFSD14AQ96MC6 490 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 FNBP1Q96RU3 617 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 POP1Q99575 1024 aaKnown RBP11.13□□□□□ -0.63
HERC4-207ENST00000460168 KATNAL1Q9BW62 490 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 NFKBIZQ9BYH8 718 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 HAPLN2Q9GZV7 340 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 FBXL5Q9UKA1 691 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 HTTP42858 3142 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 A0A087WZ62 844 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 LRRIQ3A6PVS8 624 aaPredicted RBP11.13□□□□□ -0.63
HERC4-207ENST00000460168 PDLIM1O00151 329 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 ACKR2O00590 384 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 PLEKP08567 350 aaPredicted RBP11.13□□□□□ -0.63
HERC4-207ENST00000460168 USP4Q13107 963 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 SLC9C1Q4G0N8 1177 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 C1orf220Q5T0J3 134 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 KRT39Q6A163 491 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 ZBTB33Q86T24 672 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 LINC01465Q8N7H1 131 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 PPP1R13LQ8WUF5 828 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 SYN2Q92777 582 aaPredicted RBP11.13□□□□□ -0.63
HERC4-207ENST00000460168 PMM1Q92871 262 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 ACO2Q99798 780 aaKnown RBP11.13□□□□□ -0.63
HERC4-207ENST00000460168 FDXACB1Q9BRP7 624 aaPredicted RBP11.13□□□□□ -0.63
HERC4-207ENST00000460168 INTS2Q9H0H0 1204 aaKnown RBP11.13□□□□□ -0.63
HERC4-207ENST00000460168 MINDY3Q9H8M7 445 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 IFT122Q9HBG6 1241 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 SPC25Q9HBM1 224 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 SIX2Q9NPC8 291 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 RNF186Q9NXI6 227 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 RBAKQ9NYW8 714 aaPredicted RBP11.13□□□□□ -0.63
HERC4-207ENST00000460168 ARHGAP20Q9P2F6 1191 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 APEX2Q9UBZ4 518 aa11.13□□□□□ -0.63
HERC4-207ENST00000460168 FBXO9Q9UK97 447 aaPredicted RBP11.13□□□□□ -0.63
HERC4-207ENST00000460168 DNAH12Q6ZR08 3092 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 CASP8AP2Q9UKL3 1982 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 ZEB2O60315 1214 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 CSDE1O75534 798 aaKnown RBP11.12□□□□□ -0.63
HERC4-207ENST00000460168 H2AFXP16104 143 aaPredicted RBP11.12□□□□□ -0.63
HERC4-207ENST00000460168 TNNI1P19237 187 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 RANBP1P43487 201 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 PSEN2P49810 448 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 CAP1Q01518 475 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 POU5F1Q01860 360 aaKnown RBP11.12□□□□□ -0.63
HERC4-207ENST00000460168 MBTD1Q05BQ5 628 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 POU5F1BQ06416 359 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 ENOX2Q16206 610 aaKnown RBP11.12□□□□□ -0.63
HERC4-207ENST00000460168 GNASQ5JWF2 1037 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 ATF7IP2Q5U623 682 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 DPY19L2P1Q6NXN4 242 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 GJB7Q6PEY0 223 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 VPS37AQ8NEZ2 397 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 TMEM117Q9H0C3 514 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 FAM49AQ9H0Q0 323 aaPredicted RBP11.12□□□□□ -0.63
HERC4-207ENST00000460168 FZD8Q9H461 694 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 TMEM8AQ9HCN3 771 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 LZTFL1Q9NQ48 299 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 TOPORSQ9NS56 1045 aaPredicted RBP11.12□□□□□ -0.63
HERC4-207ENST00000460168 PRMT7Q9NVM4 692 aaPredicted RBP11.12□□□□□ -0.63
HERC4-207ENST00000460168 GINS2Q9Y248 185 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 BRCA2P51587 3418 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 SEPT4O43236 478 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 B4GALT5O43286 388 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 AKR1B10O60218 316 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 PNMA6AP0CW24 399 aaPredicted RBP11.12□□□□□ -0.63
HERC4-207ENST00000460168 RARBP10826 455 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 ELNP15502 786 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 VEGFBP49765 207 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 ZNF132P52740 706 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 KRT83P78385 493 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 CACNB2Q08289 660 aaPredicted RBP11.12□□□□□ -0.63
HERC4-207ENST00000460168 TRIM32Q13049 653 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 SPA17Q15506 151 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 ASIC2Q16515 512 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 ZNF568Q3ZCX4 644 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 ARHGAP29Q52LW3 1261 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 WLSQ5T9L3 541 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 IQCEQ6IPM2 695 aa11.12□□□□□ -0.63
HERC4-207ENST00000460168 PACS1Q6VY07 963 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms