RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 SOX8P57073 446 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 CLRN1P58418 232 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 RAP2BP61225 183 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 GNAI1P63096 354 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 FMO1Q01740 532 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 CNGA2Q16280 664 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 LONRF3Q496Y0 759 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 CCDC93Q567U6 631 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 FKBP15Q5T1M5 1219 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 XP32Q5T750 250 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 TOGARAM2Q6ZUX3 1019 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 FRMD5Q7Z6J6 570 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 SP8Q8IXZ3 490 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 SMC5Q8IY18 1101 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 SYT8Q8NBV8 401 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 NLGN4YQ8NFZ3 816 aaPredicted RBP6.76□□□□□ -1.33
CCDC50-203ENST00000460064 PGBD4Q96DM1 585 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 BORCS6Q96GS4 357 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 TOX2Q96NM4 488 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 FMNL2Q96PY5 1086 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 RSAD1Q9HA92 442 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 CPNE7Q9UBL6 633 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 CORO2BQ9UQ03 480 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 ISM1B1AKI9 464 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 B5MCH6 92 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 MYO1FO00160 1098 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 KPNA5O15131 536 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 PJA2O43164 708 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 EIF3JO75822 258 aaKnown RBP6.75□□□□□ -1.33
CCDC50-203ENST00000460064 POMCP01189 267 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 NPR1P16066 1061 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 ZKSCAN1P17029 563 aaPredicted RBP6.75□□□□□ -1.33
CCDC50-203ENST00000460064 CFPP27918 469 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 RPS19P39019 145 aaKnown RBP6.75□□□□□ -1.33
CCDC50-203ENST00000460064 PRIM2P49643 509 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 NOMO3P69849 1222 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 EXOSC9Q06265 439 aaKnown RBP6.75□□□□□ -1.33
CCDC50-203ENST00000460064 GRM7Q14831 915 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 BMT2Q1RMZ1 405 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 FAM83AQ86UY5 434 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 GIMAP8Q8ND71 665 aaPredicted RBP6.75□□□□□ -1.33
CCDC50-203ENST00000460064 MRGPRX1Q96LB2 322 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 CPPED1Q9BRF8 314 aaPredicted RBP6.75□□□□□ -1.33
CCDC50-203ENST00000460064 NDC1Q9BTX1 674 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 PACSIN1Q9BY11 444 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 BTBD1Q9H0C5 482 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 GSTO2Q9H4Y5 243 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 BRD9Q9H8M2 597 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 MSL2Q9HCI7 577 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 FNIP2Q9P278 1114 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 ZDHHC8Q9ULC8 765 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 DMTF1Q9Y222 760 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.75□□□□□ -1.33
CCDC50-203ENST00000460064 PNPLA7Q6ZV29 1317 aa6.75□□□□□ -1.33
CCDC50-203ENST00000460064 TBX3O15119 743 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 LAMTOR5O43504 91 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 AMHP03971 560 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 C8AP07357 584 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 GNAT2P19087 354 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 TM4SF4P48230 202 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 UBXN2BQ14CS0 331 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 SLFN13Q68D06 897 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 MFSD5Q6N075 450 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 DPP9Q86TI2 863 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 LRRC56Q8IYG6 542 aaPredicted RBP6.74□□□□□ -1.33
CCDC50-203ENST00000460064 AOPEPQ8N6M6 819 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 SUCLG2Q96I99 432 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 GNRHR2Q96P88 292 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 P2RX7Q99572 595 aaKnown RBP6.74□□□□□ -1.33
CCDC50-203ENST00000460064 PLA2G12BQ9BX93 195 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 SPON1Q9HCB6 807 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 PLCB1Q9NQ66 1216 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 PLA2G3Q9NZ20 509 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 ZNF536O15090 1300 aa6.74□□□□□ -1.33
CCDC50-203ENST00000460064 PRR5-ARHGAP8B1AHC4 643 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 MFAP3LO75121 409 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 SLC43A1O75387 559 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 MATN4O95460 622 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 ALAS1P13196 640 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 EPHB4P54760 987 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 ATXN7L2Q5T6C5 722 aaPredicted RBP6.73□□□□□ -1.33
CCDC50-203ENST00000460064 C1orf228Q6PIY5 440 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 PCSK9Q8NBP7 692 aaKnown RBP6.73□□□□□ -1.33
CCDC50-203ENST00000460064 ZFP28Q8NHY6 868 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 ZSCAN18Q8TBC5 510 aaPredicted RBP6.73□□□□□ -1.33
CCDC50-203ENST00000460064 TFAP2CQ92754 450 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 SGCZQ96LD1 299 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 RIPOR3Q96MK2 946 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 OR14A2Q96R54 314 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 SACM1LQ9NTJ5 587 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 CFAP97Q9P2B7 532 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 DUSP10Q9Y6W6 482 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 ADAMTS20P59510 1910 aa6.73□□□□□ -1.33
CCDC50-203ENST00000460064 NPEPPSL1A6NEC2 478 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 PRSS29PA6NIE9 313 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 FOXN3O00409 490 aaPredicted RBP6.72□□□□□ -1.33
CCDC50-203ENST00000460064 TBC1D4O60343 1298 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 TRIM13O60858 407 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 GJB1P08034 283 aa6.72□□□□□ -1.33
CCDC50-203ENST00000460064 SETSIPP0DME0 302 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms